Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01187 ATGAGAGAGCCGCAGAACGACACCGTAGCGACCCAACTACCAACCACAAACGACGACGTGCCATCCGGCGTCGTTTTGTTCGGGAAGTACGAGTTGAAGAGGTTACTGGGAGTCGGCGCGTTCGGCAAGGTCTACCACGCCACCACCGTCGACACGCGCCAGAGCGTGGCGGTGAAGGCCGTCAGCAAAAGCAAGGTCGTAAACGGAGGTTTTGCCGCCAACGTGGAACGTGAGATCTCTATCATGCGTCGCCTCCACCACTCCAACATCATTGACCTCTTTGAAGTTCTCGCGACGAAGACCAAAATCTACTTCGTCATGGAGTTTGCCGCCGGCGGCGAACTCTTCCACGCGGTCGCCAGAAAAGGGCGGCTGGAGGAGATCGACGCCAGGTTTTACTTCCGGCAACTCATCTCCGCCTTGAAACACTGCCACTCGCACGGCGTGTTCCACCGCGACCTCAAGCTCGATAACCTCCTGCTCGACGAGAACGGGAATTTGAAAGTCTCCGATTTCGGGTTGAGTGCGGTCACGGGTCAGATCCGACCTGACGGGTTGTTACACACTGTTTGTGGAACGCCTACCTACGTGGCACCCGAGATTCTGGTGAAGAGAGGCTATGATGGTGCGAAAGTGGATCTGTGGTCGTGCGGCGTCGTTTTGTTTGCGCTCACTGCAGGTTATTTACCATTCAATGATTGCAACGTCACCGTTTTGTACAGAAAGATTTACCGCGGTCAATTCCGGTTCCCTAGGTGGATGTCTAGTGATCTGAGGTACCTCTTATCACGCTTGTTGGACACAAATCCCGAGACCAGGATTACCATTGATGAGATCTACCAAGACACGTGGTTCAACGCGGGTGAGGACCAGTACGAACCGGTTCGGGTCAAGGAGAGTGAATGCGTGTGTGGGGAGAGCCGAACCGGGTTCGAGTCGCTAAACGCGTTCGACTTAATTTCTTTTTCGACCGGTTTGGACATGTCGGGTCTTTTCGAGGATCCGAACGGGTCAGATTCGGTGGAACGGGTTGTTTCCGCCGCGGAGCCGGAGAATATTATGGAGAGAGTGGAGGCGGTGGCGGAGGAAGGGAGGGTGGTGGTGAGGAGGGAGAAGAACGGTGGTGGAGCGAAGTTGGAAGGGCAGGACGGTAATTTGTTAGGTCTCGTAGTAGTTTACCGGTTAACGGAAGAGCTGGTAGTGGTTGAAATGAAGAGAAGTGAGAAGGGAGGGGAATGTGGCGCGAAGCTTTGGAAAGATAAACTGCTACCTCTGCTTATTGAATTGGCAGGTGAACGGGAAGCGCCGGTTTCCGGTGACTTCTGTAACATATAG 1335 0.5423 MREPQNDTVATQLPTTNDDVPSGVVLFGKYELKRLLGVGAFGKVYHATTVDTRQSVAVKAVSKSKVVNGGFAANVEREISIMRRLHHSNIIDLFEVLATKTKIYFVMEFAAGGELFHAVARKGRLEEIDARFYFRQLISALKHCHSHGVFHRDLKLDNLLLDENGNLKVSDFGLSAVTGQIRPDGLLHTVCGTPTYVAPEILVKRGYDGAKVDLWSCGVVLFALTAGYLPFNDCNVTVLYRKIYRGQFRFPRWMSSDLRYLLSRLLDTNPETRITIDEIYQDTWFNAGEDQYEPVRVKESECVCGESRTGFESLNAFDLISFSTGLDMSGLFEDPNGSDSVERVVSAAEPENIMERVEAVAEEGRVVVRREKNGGGAKLEGQDGNLLGLVVVYRLTEELVVVEMKRSEKGGECGAKLWKDKLLPLLIELAGEREAPVSGDFCNI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01187 444 CDD CIPK_C 315 426 - -
Viun5g01187 444 FunFam Aurora kinase A 24 113 - -
Viun5g01187 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Viun5g01187 444 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Viun5g01187 444 Gene3D Transferase(Phosphotransferase) domain 1 24 313 - -
Viun5g01187 444 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Viun5g01187 444 FunFam CAMK family protein kinase 25 310 - -
Viun5g01187 444 Gene3D Kinase associated domain 1, KA1 314 430 - -
Viun5g01187 444 ProSiteProfiles Protein kinase domain profile. 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01187 444 Pfam NAF domain 312 369 IPR004041 GO:0007165
Viun5g01187 444 SUPERFAMILY Protein kinase-like (PK-like) 26 294 IPR011009 -
Viun5g01187 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 25 407 - -
Viun5g01187 444 SMART serkin_6 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01187 444 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01187 Viun-Chr5 8384528 8386357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01187 25 432 CBL-interacting serine-threonine protein kinases AT2G30360 55.797 9.67e-159 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Viun5g01187 Pkinase 1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01187 - K12761 gmx:100788245 682.559