Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01185 ATGGGTAACTACAGGTTCAAATTATCAGACATGATCCCCAATGCCTGGTTTTACAAACTCAAGGACATGGGAAAACCAAAAAAGCAAACCCCATCTCAGTCCAAGAAGAAAAAACAACCTTCACCAGCCTCAACCACACCACCATCAAAACCAAAGCAATCCCACCAATTCAATCCCAGAAAATCTTACTACTTCACAAGGGAGCTTAACCCAAATGATAGAATCTATACCTCACCAGCAAATAACCAAAATGCCAAATTCAGCAATTCCCCTGAAGCCCCCAGAAAATCATCCAAACAAAGACTCAAGAGAAGAACTGCAAGGACTTCTTCACCTAAGCTTGCTGTTGCTGCTAACAATGACAACTCCTCGTCACCACATGATAGCTCTGCTGAATCAGAGCACCCTGACCCAGAATTCAGAACAGATCGTGTTCTTGCCACTGAAGCATTAGATCAAACGGTTTCTTGGTCCAACTCTTTCGCCTGCAAGGTACACTCCAACGCCAAGGACATCATCATTGATGTAGACAACAGTTCCACAGAGAGAAAAGACGATAAGCTAGAAGGGTATGAATATGATTCCTTCTCGGACCTCGTGCTCCCACCAATTGTGACCAAGCCTGCAAAATTCGATGACTTGCTGAGTGATGCCAAGAAGAAAGAAACCAAAATGGATGATGCCCCAGAAGAGCCAAACCTGAAGGGACCTCTAAGAGTTAAAATTGTGAAGGAAGGCACTGCACCAATGAAGGAACATAAGAGCACCCCTGTTAGGAGATTCTCTGTGAGCTCTTCTCCAGGAGTGAAGCTTCGGATGAACTCGCCGCGAATTGGCAGCCGGAAAACTCAGACACATGGCCGGAGGAGTGTGTCGTCCGCCGCTGGCTCCGGCTCCCGGAGAAGCCTTTCGGATAGCTTTGCAATTGTGAAGTCATCACTGAATCCTCAGAGGGACTTCAGAGAATCAATGGTGGAGATGATTGTGCAGAACAACATAAGGACATCAAAGGATTTAGAGGATCTTCTTGCTTGCTATCTTTCTCTTAATTCAGATGAGTATCATGACCTCATTATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATTAG 1119 0.4468 MGNYRFKLSDMIPNAWFYKLKDMGKPKKQTPSQSKKKKQPSPASTTPPSKPKQSHQFNPRKSYYFTRELNPNDRIYTSPANNQNAKFSNSPEAPRKSSKQRLKRRTARTSSPKLAVAANNDNSSSPHDSSAESEHPDPEFRTDRVLATEALDQTVSWSNSFACKVHSNAKDIIIDVDNSSTERKDDKLEGYEYDSFSDLVLPPIVTKPAKFDDLLSDAKKKETKMDDAPEEPNLKGPLRVKIVKEGTAPMKEHKSTPVRRFSVSSSPGVKLRMNSPRIGSRKTQTHGRRSVSSAAGSGSRRSLSDSFAIVKSSLNPQRDFRESMVEMIVQNNIRTSKDLEDLLACYLSLNSDEYHDLIIKVFKQIWFDLTDN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01185 372 MobiDBLite consensus disorder prediction 128 143 - -
Viun5g01185 372 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 40 370 IPR038933 GO:0045892
Viun5g01185 372 ProSiteProfiles OVATE domain profile. 309 368 IPR006458 -
Viun5g01185 372 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Viun5g01185 372 NCBIfam uncharacterized plant-specific domain TIGR01568 308 370 IPR006458 -
Viun5g01185 372 MobiDBLite consensus disorder prediction 112 127 - -
Viun5g01185 372 MobiDBLite consensus disorder prediction 250 300 - -
Viun5g01185 372 Pfam Transcriptional repressor, ovate 313 369 IPR006458 -
Viun5g01185 372 MobiDBLite consensus disorder prediction 259 300 - -
Viun5g01185 372 MobiDBLite consensus disorder prediction 22 143 - -
Viun5g01185 372 MobiDBLite consensus disorder prediction 35 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01185 Viun-Chr5 8362422 8364289 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun5g01185 Ovate 2.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01185 - - gmx:100794572 521.161