Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01183 ATGGAATTGCCTGATAATACAGTCAATACAGCCATGTATAAGGGGAGATTCTGCACTAGTGGTGGAGTTAAGTCTCAGCTTGGATATGTTGAAACTGATCCATCTGGTCGATATGGTCGTTTCAGGGATGTTCTAGGCAAAGGAGCAATGAAGACTGTATATAGGGCATTTGATGAGTTACTGGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAACAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTGAAGCACCTCAACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATCACTGAATTGTTCACCTCCGGTACACTTAGAGAGTACAGGCAGAAGTATAAGCGAGTAGATATCCGAGCAGTTAAGATTTGGGCTCGCCAGATTCTTGGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTAATACACAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGAGGGTCAAGATTGGTGACTTAGGCCTAGCAGCTATACTTCGTAGCTCCCAACATGCCCACAGTGTCATAGGCACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGGTAGACATATATTCCTTTGGTATGTGCATGATAGAGTTGCTTACTTTTGAGTTCCCATACAGTGAATGCGCCAACGCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCTAATGCTTTTTACAGAATCCCAGTTTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGTCAAATGTCTCAGATAGACCATCAGCAAAGGAGCTCTTGTTGGACCCTTTTTTAGCGGTGGACCAACTTGAAATACCATTGCCACCAAACATACCATTATTTCTGAATAACACTCCACAGCTTAATTCCGCTCCACTAGTTCCCATTGAGCATCATCATGATCAAAAAAAGAGTGCAGAAATGACAATTACTGGTTCAATTAACGAAGAGGACAACACAGTTTTCCTCAAAGTGAGGATATCTGACATAACAGGGCACACGAGACATGTGTTCTTCCCATTTGATACATTAAAAGACACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAAATTAGCCATTTGGAACCATTGGAGATTGCTGCAATGATAGATCATGAGGTATCAGCTTTGGTTCCGAGTTGGAGGGACAGGGTTAAGTGTCACCATCAACGACAACACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCACCACCCCTTCTTCTTATCATCTTCTCCATCATCCCCTCGTGGTTCTGGCCACATTTCTGCTTCCAACTCCTTCAAAACCCATGTTCGCGGCAACCATTACCCTTTTGCTCAAGAAGGGCCTCAAGATGACATGTTCATGAACAACGACGACGCAAGCTCTCAAGCCTCGATGAACTCCTTCAAGTATTCAACCTTCCAATTCTGCGACCCGGGCCACGAAGACGAGCACGACGGAACCGAACGCAACAAGTGCACCACAATATCGTGCCGTGGCGGCGAAGAAGGCGAACCCGGTTTGGTGAACCCGGTATTGTACCCGCCGCGGATTGAGTGTTCGTGCGGGTGCAGGTTTGGGTCGGGTCACGGGTGCCCGAGGCTGACTCGGATCCGGTCGTGCCCGCACGAGCGGCGGAGCCTGCAGCAGCTCCAACGGTCGTTGATGTTGGAGGAGATTTACAAGTACAAAAGACGCTTCTTCAACACCGTTGGTGCCGTTGAGAACATCGGGTTTCGGCATCCACTAAGAGGTGGTGTATGCTTTCCTCGTGTGTAG 1875 0.4656 MELPDNTVNTAMYKGRFCTSGGVKSQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLNHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYKRVDIRAVKIWARQILGGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIELLTFEFPYSECANAAQIYKKVTSGKLPNAFYRIPVLEAQKFVGKCLSNVSDRPSAKELLLDPFLAVDQLEIPLPPNIPLFLNNTPQLNSAPLVPIEHHHDQKKSAEMTITGSINEEDNTVFLKVRISDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDHEVSALVPSWRDRVKCHHQRQHSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHISASNSFKTHVRGNHYPFAQEGPQDDMFMNNDDASSQASMNSFKYSTFQFCDPGHEDEHDGTERNKCTTISCRGGEEGEPGLVNPVLYPPRIECSCGCRFGSGHGCPRLTRIRSCPHERRSLQQLQRSLMLEEIYKYKRRFFNTVGAVENIGFRHPLRGGVCFPRV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01183 624 Pfam Protein kinase domain 43 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01183 624 Gene3D Transferase(Phosphotransferase) domain 1 122 302 - -
Viun5g01183 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Viun5g01183 624 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 507 - -
Viun5g01183 624 FunFam probable serine/threonine-protein kinase WNK9 122 302 - -
Viun5g01183 624 SUPERFAMILY Protein kinase-like (PK-like) 41 298 IPR011009 -
Viun5g01183 624 CDD STKc_WNK 37 297 - -
Viun5g01183 624 ProSiteProfiles Protein kinase domain profile. 39 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01183 624 FunFam Probable serine/threonine-protein kinase WNK1 24 120 - -
Viun5g01183 624 SMART serkin_6 39 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01183 624 Gene3D Phosphorylase Kinase; domain 1 23 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01183 Viun-Chr5 8332951 8336789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01183 20 437 MAP Kinase Kinase Kinase AT3G51630 66.508 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun5g01183 Pkinase 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01183 K08867 - gmx:100272206 1051.58