Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01168 ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCCGATTACATATGTTAAACGTGTAAGCCATAATGAGCATCTGCCTGCAGTGCTGCCTGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAAGACCCGAGTGAAACCCATTCAACCCATTAGTAAAGTCAATAACAACAGAACAAGAACATTATCTGCTCCATCAACTCTTGATGCCGCAGAACAAGATGCGTTGTCCTCAATTGAGTATGAGGAACAAGAAGAGTCTAAACACCGAACTGGATCAATGAAGGAGCGTTCATCTAGTCCACAACCCTTACCACTCCCATCCCCACAGGGTGGTGCTGTATTGAAGGCTATTGGAAGCTTTAAGTCAGTTACAGCTAGTGGTCCTCTATCTGCTTCTGGACCTTTGCCACTTCCACCTACCGGGTCACTTCGGAATTTTCTGTATGATGAAATTGCCGCTGCTTGCCACAATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCATCCACCATATATAAGGCTTCCTTTGGTGATGATGTTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACACGACTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCCCTGCAACATCCAAACCTCTGCAAATTGCTAGGATTTCATGCTCGAGAGGCTTCAGAACATAGAATGTTGGTTTATGAGAGACTATACCATGGAAGCTTGGATCGCCTATTGTATGGGAGATCTGATGGGCCATCAATAGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTTTAACTTTCTTGCATGAAGAAGGGCCATTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATACGGTTGTGTTGGACATATTCCCGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTCTCAATGGAAACACTGGAGAAAGGAATGCTCACCCCAAAGAGCAACGTATGGAGCTTTGGAATATTCCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGACAGCCGTCACCCGAAGGAAGAGAGGAATCTAGTGAAGTGGAGCCGGCCGTTCCTGGCCGACAACTACCGTCTGTCGTTGATCATGGATCCTCAACTGAAGGGTCGGTTCCCTTCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTCCAAAAGGAGCCATCAGAGAGACCTACCATGAGAACTGTTGTTGAGCATCTGAAGATGATACAGGATTTGAAATACTCATGCAGGTTCCCTCTGCAAGAGCCAGCAGCATCAAACTCTGGAAAACATATGTCAAGATCACCAAGTCTGAATGGCATGATCTGCCCAGTACCAAGGTTGAATTTCTCACCATCACCACCATCTGGAGTTCCAGCAGTAGCTGTTTCACCTCCAAGATGGTCTGGTGGAGTGCCTCTTCTTCCACCTCGTGCATGTTCTTCCAGTCTCTCTCTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1644 0.4495 MGCFTVLKSKKKKSDPITYVKRVSHNEHLPAVLPEPQTRTRSLQSAPPSFKTRVKPIQPISKVNNNRTRTLSAPSTLDAAEQDALSSIEYEEQEESKHRTGSMKERSSSPQPLPLPSPQGGAVLKAIGSFKSVTASGPLSASGPLPLPPTGSLRNFLYDEIAAACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREASEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVEHLKMIQDLKYSCRFPLQEPAASNSGKHMSRSPSLNGMICPVPRLNFSPSPPSGVPAVAVSPPRWSGGVPLLPPRACSSSLSLEELDRQESRKSSSSASRRASVEGF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01168 547 Gene3D Phosphorylase Kinase; domain 1 149 249 - -
Viun5g01168 547 MobiDBLite consensus disorder prediction 58 82 - -
Viun5g01168 547 MobiDBLite consensus disorder prediction 25 121 - -
Viun5g01168 547 MobiDBLite consensus disorder prediction 37 51 - -
Viun5g01168 547 ProSiteProfiles Protein kinase domain profile. 168 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01168 547 PANTHER OS01G0588500 PROTEIN-RELATED 97 447 - -
Viun5g01168 547 Pfam Protein tyrosine and serine/threonine kinase 182 443 IPR001245 GO:0004672|GO:0006468
Viun5g01168 547 MobiDBLite consensus disorder prediction 521 547 - -
Viun5g01168 547 SUPERFAMILY Protein kinase-like (PK-like) 146 453 IPR011009 -
Viun5g01168 547 Gene3D Transferase(Phosphotransferase) domain 1 251 455 - -
Viun5g01168 547 MobiDBLite consensus disorder prediction 90 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01168 Viun-Chr5 8211770 8217012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01168 140 467 Receptor kinase-like Gene Family AT4G02010 36.336 9.94e-57 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Viun5g01168 PK_Tyr_Ser-Thr 3.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01168 - - gmx:100809117 974.541