Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g01145 | ATGTGGAGCATGAATCGGTACTGTGTTTGTGTTCCATTGTTGGTGTGCTTGGTGTTGGCTATTGAGGTTGTTGTAGCACAGGATTTTAAGCCTACAGATAATATCCTGCTGGATTGTGGAGGTCCTCCATCTAGTACTGATACTGATGGCCGTGAATGGACCACTGATGTTGGTTCCAAGTTTGGTTCCTCATCGGAAAAATCCACCACCGCATCGCAGGCTGCAACTCAAGACCCTGCCGTCCCCCAGGTGCCCTACATGACAGCACGTGTGTTCCACGCGCCGTTTACCTATGCTTTCCCGGTGGCTTCCGGTTGGAAGTTCCTCCGCCTGCACTTTTACTCGGCTTCTTACTCCAACCTCAATGCATCTGATGCCCTTTTTGCGGTGACGGCAAATTCATACACGCTTCTTAGGAACTTTAGTGTTGCTCAGACCACCCTGGCTTTGAATTATGCCTACATTTTGAAGGAATATGCCATCTATGTAGAAGGGAAAACCTTGAATGTGACTTTCACTCCATCTACAAATGCATCCAACGCTTACGCGTTTGTTAATGGGATCGAGGTCGTGTCCATGCCTGATATTTATACTTCTACTGATGGAACTACCATGATAGTGGGTACAAATACTGCTTACACTATTGATAACAGCACTGCACTTGAGAATGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCCTCCCATGATACTGGTATGTTTAGGTCATGGTCTGATGATGTTCCCTTCCTCTTTGGCGCTGCATTTGGAGTTACAGAGCCTGCTGATTCAAATGTGAAGTTTGAGTATCCTCCGGGCACACCAAGTTATATTGCTCCACTTGATGTCTACACTACGGCCAGATCAATGGGCCCGAATCCGAAGATCAACACGAATTACAACTTGACTTGGATCTTCAACATTGATTCGGGGTTTTCCTATCTAGTGAGACTTCATTTTGCTGAGGTATCATCAAATATAACCAAGGTTAATCAAAGAGTGTTTGATATATTCCTCAATAATCAAACAGCTACTCCACAGGCTGATGTTATTGCCTGGGCAAACATTTTTAGCCTTTCACATTCTAATGGGGTGCCTGTGCATAAAGATTATGTTGTCTTTATTCCCGATGAGGGGGAACCACGGGTGGACCTGTGGCTTGCATTGCATCCAGATCCAACTGACAAGCCCATGTATTATGATGCTATCTTGAATGGAGTGGAGATCTTCAAAATTAATGCTACTGCAGGAAATCTGGCAGGGACAAATCCTATTCCTCCCCCTGTGCAAGATATAATTGACCCATCAACAGCTAGAACACATAATCATGGTAAATCAAAGAATCATACAGGCATAATTGCGGGAGGTGTTGTTGGAGGAGTTGTTGTAGTACTTGTGATTGGGCTATTTGCTTTAGCTGCATCTCGTCGCCGTAGGCAAGGAAGGGATTCGGGTGCAAGTGAAGGGCCATCGGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGTTATGCTTCCTCTCTCCCATCAAACCTTTGCCGTCATTTCTCATTTGCTGAAATCAAGTCTGCCACAAACAACTTTGATGAGGCTTTGCTTCTTGGCGTGGGAGGATTTGGTAAGGTTTACAAGGGAGAAATTGATGGTGGAACAACCAAAGTTGCAATTAAACGTGGAAATCCACTATCTGAGCAGGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGTCACCGTCACCTTGTCTCTCTGATTGGATACTGTGAAGAAAACACTGAAATGATCCTTGTTTATGATTATATGGCCTATGGAACACTCAGGGAGCATTTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACACACTGGTGCTAAACACACAATCATCCACCGTGATGTGAAGACAACAAACATTTTACTGGACGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCAAAAACAGGTCCAACATTGGATAATACCCATGTAAGTACCGTGGTAAAGGGTAGCTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTAACTGACAAATCAGACGTTTACTCATTTGGGGTGGTTCTCTTTGAGATATTGTGTGCTCGTCCAGCTTTGAACCCAACCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACCTCAAAGGCATTCTTGATCAAATCATTGATCCCTATCTAAAAGGCAAGATAGCTCCCGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCTGACCAGGGTATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAAAGTGGCAACGGCTTTGGCGACATTCACAATGAAGAGGAGCCGATTTATACAGATTCTAAAGGAAAGAAAGACTCTGATGCGATAGCGGGTTATGATGGTAATGTGACTGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCCAGTGAAGACTCTGATGGGTTAACCCCAAGTGCTGTCTTCTCCCAGATCATGAATCCAAAAGGGCGTTAA | 2703 | 0.4517 | MWSMNRYCVCVPLLVCLVLAIEVVVAQDFKPTDNILLDCGGPPSSTDTDGREWTTDVGSKFGSSSEKSTTASQAATQDPAVPQVPYMTARVFHAPFTYAFPVASGWKFLRLHFYSASYSNLNASDALFAVTANSYTLLRNFSVAQTTLALNYAYILKEYAIYVEGKTLNVTFTPSTNASNAYAFVNGIEVVSMPDIYTSTDGTTMIVGTNTAYTIDNSTALENVYRLNVGGNDISPSHDTGMFRSWSDDVPFLFGAAFGVTEPADSNVKFEYPPGTPSYIAPLDVYTTARSMGPNPKINTNYNLTWIFNIDSGFSYLVRLHFAEVSSNITKVNQRVFDIFLNNQTATPQADVIAWANIFSLSHSNGVPVHKDYVVFIPDEGEPRVDLWLALHPDPTDKPMYYDAILNGVEIFKINATAGNLAGTNPIPPPVQDIIDPSTARTHNHGKSKNHTGIIAGGVVGGVVVVLVIGLFALAASRRRRQGRDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYLKGILDQIIDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGNGFGDIHNEEEPIYTDSKGKKDSDAIAGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR | 900 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g01145 | 900 | SMART | serkin_6 | 542 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun5g01145 | 900 | Gene3D | Transferase(Phosphotransferase) domain 1 | 619 | 833 | - | - | |
Viun5g01145 | 900 | Pfam | Malectin-like domain | 37 | 414 | IPR024788 | - | |
Viun5g01145 | 900 | FunFam | Receptor-like protein kinase FERONIA | 514 | 618 | - | - | |
Viun5g01145 | 900 | ProSiteProfiles | Protein kinase domain profile. | 542 | 816 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun5g01145 | 900 | MobiDBLite | consensus disorder prediction | 841 | 900 | - | - | |
Viun5g01145 | 900 | SUPERFAMILY | Protein kinase-like (PK-like) | 516 | 815 | IPR011009 | - | |
Viun5g01145 | 900 | MobiDBLite | consensus disorder prediction | 859 | 893 | - | - | |
Viun5g01145 | 900 | Gene3D | Phosphorylase Kinase; domain 1 | 503 | 618 | - | - | |
Viun5g01145 | 900 | MobiDBLite | consensus disorder prediction | 47 | 76 | - | - | |
Viun5g01145 | 900 | Gene3D | - | 220 | 415 | - | - | |
Viun5g01145 | 900 | Gene3D | - | 34 | 194 | - | - | |
Viun5g01145 | 900 | PANTHER | OS03G0124300 PROTEIN-RELATED | 11 | 484 | IPR046957 | GO:0004672 | |
Viun5g01145 | 900 | Pfam | Protein tyrosine and serine/threonine kinase | 548 | 810 | IPR001245 | GO:0004672|GO:0006468 | |
Viun5g01145 | 900 | CDD | STKc_IRAK | 548 | 814 | - | - | |
Viun5g01145 | 900 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 663 | 675 | IPR008271 | GO:0004672|GO:0006468 | |
Viun5g01145 | 900 | FunFam | FERONIA receptor-like kinase | 219 | 415 | - | - | |
Viun5g01145 | 900 | ProSitePatterns | Protein kinases ATP-binding region signature. | 548 | 571 | IPR017441 | GO:0005524 | |
Viun5g01145 | 900 | FunFam | FERONIA receptor-like kinase | 34 | 194 | - | - | |
Viun5g01145 | 900 | MobiDBLite | consensus disorder prediction | 40 | 76 | - | - | |
Viun5g01145 | 900 | FunFam | Receptor-like protein kinase FERONIA | 619 | 829 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g01145 | Viun-Chr5 | 8032174 | 8035700 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g01145 | 18 | 900 | Receptor kinase-like Gene Family | AT3G51550 | 74.492 | 0.0 | 1327 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Viun5g01145 | Malectin_like | 1.5e-39 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g01145 | - | - | gmx:100499644 | 1624.76 |