Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01145 ATGTGGAGCATGAATCGGTACTGTGTTTGTGTTCCATTGTTGGTGTGCTTGGTGTTGGCTATTGAGGTTGTTGTAGCACAGGATTTTAAGCCTACAGATAATATCCTGCTGGATTGTGGAGGTCCTCCATCTAGTACTGATACTGATGGCCGTGAATGGACCACTGATGTTGGTTCCAAGTTTGGTTCCTCATCGGAAAAATCCACCACCGCATCGCAGGCTGCAACTCAAGACCCTGCCGTCCCCCAGGTGCCCTACATGACAGCACGTGTGTTCCACGCGCCGTTTACCTATGCTTTCCCGGTGGCTTCCGGTTGGAAGTTCCTCCGCCTGCACTTTTACTCGGCTTCTTACTCCAACCTCAATGCATCTGATGCCCTTTTTGCGGTGACGGCAAATTCATACACGCTTCTTAGGAACTTTAGTGTTGCTCAGACCACCCTGGCTTTGAATTATGCCTACATTTTGAAGGAATATGCCATCTATGTAGAAGGGAAAACCTTGAATGTGACTTTCACTCCATCTACAAATGCATCCAACGCTTACGCGTTTGTTAATGGGATCGAGGTCGTGTCCATGCCTGATATTTATACTTCTACTGATGGAACTACCATGATAGTGGGTACAAATACTGCTTACACTATTGATAACAGCACTGCACTTGAGAATGTTTATAGGTTGAATGTGGGTGGGAATGATATCTCTCCCTCCCATGATACTGGTATGTTTAGGTCATGGTCTGATGATGTTCCCTTCCTCTTTGGCGCTGCATTTGGAGTTACAGAGCCTGCTGATTCAAATGTGAAGTTTGAGTATCCTCCGGGCACACCAAGTTATATTGCTCCACTTGATGTCTACACTACGGCCAGATCAATGGGCCCGAATCCGAAGATCAACACGAATTACAACTTGACTTGGATCTTCAACATTGATTCGGGGTTTTCCTATCTAGTGAGACTTCATTTTGCTGAGGTATCATCAAATATAACCAAGGTTAATCAAAGAGTGTTTGATATATTCCTCAATAATCAAACAGCTACTCCACAGGCTGATGTTATTGCCTGGGCAAACATTTTTAGCCTTTCACATTCTAATGGGGTGCCTGTGCATAAAGATTATGTTGTCTTTATTCCCGATGAGGGGGAACCACGGGTGGACCTGTGGCTTGCATTGCATCCAGATCCAACTGACAAGCCCATGTATTATGATGCTATCTTGAATGGAGTGGAGATCTTCAAAATTAATGCTACTGCAGGAAATCTGGCAGGGACAAATCCTATTCCTCCCCCTGTGCAAGATATAATTGACCCATCAACAGCTAGAACACATAATCATGGTAAATCAAAGAATCATACAGGCATAATTGCGGGAGGTGTTGTTGGAGGAGTTGTTGTAGTACTTGTGATTGGGCTATTTGCTTTAGCTGCATCTCGTCGCCGTAGGCAAGGAAGGGATTCGGGTGCAAGTGAAGGGCCATCGGGCTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGTTATGCTTCCTCTCTCCCATCAAACCTTTGCCGTCATTTCTCATTTGCTGAAATCAAGTCTGCCACAAACAACTTTGATGAGGCTTTGCTTCTTGGCGTGGGAGGATTTGGTAAGGTTTACAAGGGAGAAATTGATGGTGGAACAACCAAAGTTGCAATTAAACGTGGAAATCCACTATCTGAGCAGGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGTCACCGTCACCTTGTCTCTCTGATTGGATACTGTGAAGAAAACACTGAAATGATCCTTGTTTATGATTATATGGCCTATGGAACACTCAGGGAGCATTTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTACACTATCTACACACTGGTGCTAAACACACAATCATCCACCGTGATGTGAAGACAACAAACATTTTACTGGACGAGAAGTGGGTGGCCAAGGTTTCTGATTTTGGATTGTCAAAAACAGGTCCAACATTGGATAATACCCATGTAAGTACCGTGGTAAAGGGTAGCTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTAACTGACAAATCAGACGTTTACTCATTTGGGGTGGTTCTCTTTGAGATATTGTGTGCTCGTCCAGCTTTGAACCCAACCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACCTCAAAGGCATTCTTGATCAAATCATTGATCCCTATCTAAAAGGCAAGATAGCTCCCGAATGCTTCAAGAAGTTTGCCGAGACTGCGATGAAGTGTGTGGCTGACCAGGGTATTGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAAAGTGGCAACGGCTTTGGCGACATTCACAATGAAGAGGAGCCGATTTATACAGATTCTAAAGGAAAGAAAGACTCTGATGCGATAGCGGGTTATGATGGTAATGTGACTGACTCCAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCCAGTGAAGACTCTGATGGGTTAACCCCAAGTGCTGTCTTCTCCCAGATCATGAATCCAAAAGGGCGTTAA 2703 0.4517 MWSMNRYCVCVPLLVCLVLAIEVVVAQDFKPTDNILLDCGGPPSSTDTDGREWTTDVGSKFGSSSEKSTTASQAATQDPAVPQVPYMTARVFHAPFTYAFPVASGWKFLRLHFYSASYSNLNASDALFAVTANSYTLLRNFSVAQTTLALNYAYILKEYAIYVEGKTLNVTFTPSTNASNAYAFVNGIEVVSMPDIYTSTDGTTMIVGTNTAYTIDNSTALENVYRLNVGGNDISPSHDTGMFRSWSDDVPFLFGAAFGVTEPADSNVKFEYPPGTPSYIAPLDVYTTARSMGPNPKINTNYNLTWIFNIDSGFSYLVRLHFAEVSSNITKVNQRVFDIFLNNQTATPQADVIAWANIFSLSHSNGVPVHKDYVVFIPDEGEPRVDLWLALHPDPTDKPMYYDAILNGVEIFKINATAGNLAGTNPIPPPVQDIIDPSTARTHNHGKSKNHTGIIAGGVVGGVVVVLVIGLFALAASRRRRQGRDSGASEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYLKGILDQIIDPYLKGKIAPECFKKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGNGFGDIHNEEEPIYTDSKGKKDSDAIAGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01145 900 SMART serkin_6 542 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01145 900 Gene3D Transferase(Phosphotransferase) domain 1 619 833 - -
Viun5g01145 900 Pfam Malectin-like domain 37 414 IPR024788 -
Viun5g01145 900 FunFam Receptor-like protein kinase FERONIA 514 618 - -
Viun5g01145 900 ProSiteProfiles Protein kinase domain profile. 542 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01145 900 MobiDBLite consensus disorder prediction 841 900 - -
Viun5g01145 900 SUPERFAMILY Protein kinase-like (PK-like) 516 815 IPR011009 -
Viun5g01145 900 MobiDBLite consensus disorder prediction 859 893 - -
Viun5g01145 900 Gene3D Phosphorylase Kinase; domain 1 503 618 - -
Viun5g01145 900 MobiDBLite consensus disorder prediction 47 76 - -
Viun5g01145 900 Gene3D - 220 415 - -
Viun5g01145 900 Gene3D - 34 194 - -
Viun5g01145 900 PANTHER OS03G0124300 PROTEIN-RELATED 11 484 IPR046957 GO:0004672
Viun5g01145 900 Pfam Protein tyrosine and serine/threonine kinase 548 810 IPR001245 GO:0004672|GO:0006468
Viun5g01145 900 CDD STKc_IRAK 548 814 - -
Viun5g01145 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 663 675 IPR008271 GO:0004672|GO:0006468
Viun5g01145 900 FunFam FERONIA receptor-like kinase 219 415 - -
Viun5g01145 900 ProSitePatterns Protein kinases ATP-binding region signature. 548 571 IPR017441 GO:0005524
Viun5g01145 900 FunFam FERONIA receptor-like kinase 34 194 - -
Viun5g01145 900 MobiDBLite consensus disorder prediction 40 76 - -
Viun5g01145 900 FunFam Receptor-like protein kinase FERONIA 619 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01145 Viun-Chr5 8032174 8035700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01145 18 900 Receptor kinase-like Gene Family AT3G51550 74.492 0.0 1327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun5g01145 Malectin_like 1.5e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01145 - - gmx:100499644 1624.76