Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g01139 | ATGATGCTACAGTCCTACTTTTCAACAATTCCAATTTTCCTCCTCCTACTTGTGTTTCCTCAAACTAAAGCTGATCTACACTCAGAAAAGCGAGCTCTTCTTGATTTTTCTTCTGCACTTCATCATGGCCCAAGAGTGAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTGGGAGTTACATGTAGTCATGATGGGTCCCATGTGCTTTCTGTGAGGCTTCCCGGTGTGGGACTTCGAGGTTCTATCCCACCAAACACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGCCTTAGGTCCAACACCTTGAAGGGGAACCTTCCAAGTGACCTACTTTCCCTTCCTTCTTTGCGCTTTGTATATCTCCAACACAACAACTTATCAGGTCCTATTCCTGATTCACTGCCACCACGGCTTATCTTTCTTGATCTGTCCTATAACTCTTTCACAGGACAAATTCCAGACTCAATCCAAAACTTGACACATCTAATAGGACTCAACCTCCAAAACAACTCTCTCACAGGATCCATTCCTGATGTTAACCTTCCTAGCCTTAAGAATTTGGATTTGAGCTTCAACTACTTGAATGGTTCTATTCCTTCATGTTTTCAGAAGTTTCCTGGCTCCTCATTTAGAGGGAATATGATGCTATGTGGAGCACCTTTGAAACAATGTTCTTCGGTTTCAACTTCTACCACATTGTCTCCATCGTCAGTCTCTCAAAGACCAAGTGATCCATCAACCAGGAAAATTGGCAAGGGAGCAAAAATAGCAATTATTTTGGGGGTTGTCACATTGCTGTTTCTTCCAGGTCTTATAGTAGTGTTTTGCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTTGCTCCTACAGAGAAAGGTCAGAAGCTTAAGGAGGACTTTGGTAGTGGTGTGCAAGAGCCTGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTGCTTGGGAAGGGAAGTTGCGGAACGACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAAAGAGGTGGCTATGGGGAAAAAAGAATTTGAACAGCAAATGGAGATTGTTCAAAGACTTGATCATCACCCAAATGTGATTCCCCTCCGTGCTTACTACTATTCTAAAGATGAAAAACTAATGGTTTACGACTACTCCACAGCCGGAAGTTTTTCCAAGTTACTGCATGGAACCAGGGAAACTGGACGAGCTCCACTAGATTGGGATTCAAGATTGAAGATTGTGGTTGGAGCTGCAAGGGGTGTTTGTCATATTCACTCAGCTAATGGAAGGAAACTTGTCCATGGCAACATAAAATCATCTAATGTGATTCTCACAATAGATCTTCAAGGCTGTATATCAGATTTTGGCCTAACTCCCCTGACAAATTTCTGTGCCTCCTCTAGAAGTCCAGGCTATGGAGCACCTGAAGTTATTGAAACAAGAAAGTCCACTCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGAGATTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGTTAATGAGGTATCCAAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGTGTAGCAGTGATGCCTGACTCAAGACCCTCCATGGTGGAAGTTGTTAGAACAATAGAAGAAATTAGAGCTTGCATTTATTAA | 1824 | 0.4211 | MMLQSYFSTIPIFLLLLVFPQTKADLHSEKRALLDFSSALHHGPRVNWNSSTSICTSWVGVTCSHDGSHVLSVRLPGVGLRGSIPPNTLGKLNGLISLSLRSNTLKGNLPSDLLSLPSLRFVYLQHNNLSGPIPDSLPPRLIFLDLSYNSFTGQIPDSIQNLTHLIGLNLQNNSLTGSIPDVNLPSLKNLDLSFNYLNGSIPSCFQKFPGSSFRGNMMLCGAPLKQCSSVSTSTTLSPSSVSQRPSDPSTRKIGKGAKIAIILGVVTLLFLPGLIVVFCCFKKKVGEQNVAPTEKGQKLKEDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLKEVAMGKKEFEQQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGTRETGRAPLDWDSRLKIVVGAARGVCHIHSANGRKLVHGNIKSSNVILTIDLQGCISDFGLTPLTNFCASSRSPGYGAPEVIETRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEEIDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDSRPSMVEVVRTIEEIRACIY | 607 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g01139 | 607 | SUPERFAMILY | L domain-like | 43 | 224 | - | - | |
Viun5g01139 | 607 | FunFam | Probable inactive receptor kinase RLK902 | 26 | 183 | - | - | |
Viun5g01139 | 607 | ProSiteProfiles | Protein kinase domain profile. | 332 | 602 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun5g01139 | 607 | Gene3D | Ribonuclease Inhibitor | 139 | 229 | IPR032675 | - | |
Viun5g01139 | 607 | Pfam | Protein kinase domain | 335 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun5g01139 | 607 | Gene3D | Transferase(Phosphotransferase) domain 1 | 409 | 605 | - | - | |
Viun5g01139 | 607 | Pfam | Leucine rich repeat N-terminal domain | 28 | 64 | IPR013210 | - | |
Viun5g01139 | 607 | FunFam | pollen receptor-like kinase 1 | 300 | 407 | - | - | |
Viun5g01139 | 607 | Gene3D | Phosphorylase Kinase; domain 1 | 299 | 407 | - | - | |
Viun5g01139 | 607 | SUPERFAMILY | Protein kinase-like (PK-like) | 336 | 599 | IPR011009 | - | |
Viun5g01139 | 607 | Gene3D | Ribonuclease Inhibitor | 27 | 138 | IPR032675 | - | |
Viun5g01139 | 607 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 408 | 605 | - | - | |
Viun5g01139 | 607 | PANTHER | OS05G0588300 PROTEIN | 12 | 603 | - | - | |
Viun5g01139 | 607 | Pfam | Leucine Rich Repeat | 140 | 162 | IPR001611 | GO:0005515 | |
Viun5g01139 | 607 | Pfam | Leucine Rich Repeat | 186 | 208 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g01139 | Viun-Chr5 | 8000190 | 8003247 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g01139 | 24 | 603 | Receptor kinase-like Gene Family | AT5G58300 | 61.121 | 0.0 | 709 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Viun5g01139 | Pkinase | 1.8e-35 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g01139 | - | - | var:108321341 | 1143.26 |