Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01098 ATGATTATTAAGGTTGGATCTTATTTTCCATTACTACGCACAATAAAAAACTATGAACAACAAAAATCTACCCACCGTATGACAGGGTGTTGGAAGATGAACAGAAGCATGACCTGGAATCCCTTCATGCTCATCTTTCTTTTTCTTTCTATTACCTTCTTCCATTTCGCAACTGCTGATCTTGTTTTTCTTCACCGATCTTGTAGTCACGAAAGAAGCAGTGACAACAGCCCCTATCAGACCAAGCTCAAGACCCTCCTCTCTTCCTTATCTTCCAATGCCACACCCAACGCCAACGGATTCTACAACAACACAATCCTCGGCACAAACTCCTCCGACACAGTTTATGGTCTTTTCATGTGCAGAGGTGATGTTCTTTTTGACGAGTGCAGAGATTGCGTTGCAAACGCAACCCACACTCTGTCTTCAGACACAAACTGTTCCTTGTCCAAATCGGGTGTGATTTGGTACGATGAGTGCATGGTTCGGTTTTCCAACAACTCTTTCTTCTCCACTGTGGACACATATCCCAGATATTACAGATGGAACCAGGCCAATATCTCCTCCAACCCATTAAGCTTCAACTATTTGTTAGCCAACACCATGAGAGAAACTGCTCATGAAGCAGCCAATTCAAGTAACAGGTATTCCACAAAGAAAGAAAGCTTATCGGAATTTAATACTCTTTACTGTCTAACTCAGTGCACACAAGACCTTTCACCCCAACAATGCTCAGACTGTCTTGAATCGGCAATATCAGATATTCCATCTTGCTGCGATGGAAAGCAAGGAGGAAGAGTTGTGTATCCCAGTTGTAACATCAGGTATGAATTGTACCCTTTCTACCGTGCCACCGATGAGGGACCAAAAGGACTCGTCCCAGAAACAAAATATGCACAGAGAGATTCTGAATATTCAGAAAATCCTGCTTATATTTCTCACAATTGCTCAAACAACAAAGCTGGCATTGCTTTCCAATCAAACCTCAGAACCCTCCTCTCTGCTTTCTCTTCCAAGGCCACCTCTAGATATGGATTCCAGACGCAAGAGGGAACAGCGTACGGCCTCTTCAGGTGCCGTATCGACATTCCTGCTCGCCTCTGTCAACAATGCATCCAAAACGCAACCGACAGAATAACCTCGGAGTGTGGTTTGGCTTCTGCGGAGGCTGTAATATGGTACAATCACTGCTGGCTTCGCTATTCCGCAAGAAATTTCTTCTCCAGCTACGAAACAAGTCCGAGATTTGGGAATCTTAATATCAGCAACAGCAGTCCGATACAGTCCTCTGTTGCTTCTGAGTTATCGAACCAGTTAGCTAAGGTGGCCAACATGACAGGGAACACTGATAACAAATTCCTAACAGATGAATCTCTGAGATTGAACGATGAGCAAAGAGTGTATATTCTTGGTCAGTGCTCAACGGATCTATCAACCGATGGTTGCAGTGGGTGCCTCAATGATGTGATTGGAACGGCAATTCCATGGAGCAGTTTGGGAAGCGTGGGTGGACGAGTTCTGTATCCTAGCTGTATTCTTCGCTTTGAATTGTTCCAGTTCTACAATCTCACACCTCCTCCTCCACCATCCCCACCAGGGCAAATGCACTCAAAAACGATTATCTTGATTATTACTTCCAGCATAGTTGTATCAGGGGTATTTTTCACCCTTTGTTACTATTTGATACGAAGGAAACCCAGAAAAAATAGTAGAACTATTCTTCAAGAAAATTTTGGACAAGAAAGTTCCACTATAGAGTCATTGCAATTCAATCTGCCAACAATTGAAACAGCAACAAATAATTTCTCGTACGAGAACAAAATTGGCAAAGGTGGATTTGGTGAAGTTTACAAGGGCATTCTTTATGATGGACGATCAATTGCTGTAAAAAGACTTTCAAGAAATTCTAAGCAAGGCATAGAAGAGTTCAAAAATGAAGTTCTATTAATAGCCAAACTTCAACATAGGAATCTAGTAGCATTCATAGGATTTTATCTCGATGAACAAGAAAAAATACTTATCTATGAATATGTGCCAAACAAGAGTCTCGACTACTTTTTATTTGATACTAAACAAGAAAAAGTTTTGAGCTGGAGTGAGCGTCACAATATCATAGGTGGAATTGCTCGAGGAATTCTATATTTACACGAACATTCACGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATGTACTACTAGATGAAAATATGAACCCTAACATTTCAGATTTTGGACTTGCTAGAATTGTTGAAATAGATCAAGAGGAGGAAAGTACCAATAGAATTATTGGAACATATGGGTATATGTCTCCAGAGTATGCTCTCTTTGGACAATTTTCTGAGAAATCTGATGTTTACAGTTTTGGTGTTATGATTCTCGAGATTATTACTGGAAAAAAGAATATAGGTTCATATGAATCACATCGTGTTGCTGATGGTCTTCTAAATTTTGTTTGGAGAAATTGGAGGGATGAAGCAACACTGAACATATTGGACCCAAAATTAAAAGAAAATTATTCTAATGTTGAAGTCATGAGATGCATTCAAATTGGTCTATTATGTGTTCAAGAAAACTCGGACTCGAGACCTACAATGGTAACAATTGCTTCATATCTTAGTAGTCACACTATTGAGTTGCCTTCCCCACAAGAACCAACATTTTTCTTGAACCATATAATGAATCCAATTGTTGCACATGAGTCAAGTTCAGGCCAAGATATCAACTCCATACCATCCTCTATCAATGACATATCTATAAGTGAATTTTATCCTCGATAA 2784 0.4001 MIIKVGSYFPLLRTIKNYEQQKSTHRMTGCWKMNRSMTWNPFMLIFLFLSITFFHFATADLVFLHRSCSHERSSDNSPYQTKLKTLLSSLSSNATPNANGFYNNTILGTNSSDTVYGLFMCRGDVLFDECRDCVANATHTLSSDTNCSLSKSGVIWYDECMVRFSNNSFFSTVDTYPRYYRWNQANISSNPLSFNYLLANTMRETAHEAANSSNRYSTKKESLSEFNTLYCLTQCTQDLSPQQCSDCLESAISDIPSCCDGKQGGRVVYPSCNIRYELYPFYRATDEGPKGLVPETKYAQRDSEYSENPAYISHNCSNNKAGIAFQSNLRTLLSAFSSKATSRYGFQTQEGTAYGLFRCRIDIPARLCQQCIQNATDRITSECGLASAEAVIWYNHCWLRYSARNFFSSYETSPRFGNLNISNSSPIQSSVASELSNQLAKVANMTGNTDNKFLTDESLRLNDEQRVYILGQCSTDLSTDGCSGCLNDVIGTAIPWSSLGSVGGRVLYPSCILRFELFQFYNLTPPPPPSPPGQMHSKTIILIITSSIVVSGVFFTLCYYLIRRKPRKNSRTILQENFGQESSTIESLQFNLPTIETATNNFSYENKIGKGGFGEVYKGILYDGRSIAVKRLSRNSKQGIEEFKNEVLLIAKLQHRNLVAFIGFYLDEQEKILIYEYVPNKSLDYFLFDTKQEKVLSWSERHNIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMNPNISDFGLARIVEIDQEEESTNRIIGTYGYMSPEYALFGQFSEKSDVYSFGVMILEIITGKKNIGSYESHRVADGLLNFVWRNWRDEATLNILDPKLKENYSNVEVMRCIQIGLLCVQENSDSRPTMVTIASYLSSHTIELPSPQEPTFFLNHIMNPIVAHESSSGQDINSIPSSINDISISEFYPR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01098 927 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 328 922 - -
Viun5g01098 927 Gene3D Transferase(Phosphotransferase) domain 1 678 883 - -
Viun5g01098 927 SUPERFAMILY Protein kinase-like (PK-like) 585 907 IPR011009 -
Viun5g01098 927 FunFam cysteine-rich receptor-like protein kinase 10 678 881 - -
Viun5g01098 927 ProSiteProfiles Protein kinase domain profile. 602 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01098 927 ProSiteProfiles Gnk2-homologous domain profile. 175 281 IPR002902 -
Viun5g01098 927 FunFam Cysteine-rich receptor-like protein kinase 25 177 281 - -
Viun5g01098 927 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Viun5g01098 927 ProSiteProfiles Gnk2-homologous domain profile. 61 169 IPR002902 -
Viun5g01098 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 61 169 - -
Viun5g01098 927 Gene3D Phosphorylase Kinase; domain 1 564 677 - -
Viun5g01098 927 ProSiteProfiles Gnk2-homologous domain profile. 307 406 IPR002902 -
Viun5g01098 927 ProSiteProfiles Gnk2-homologous domain profile. 412 520 IPR002902 -
Viun5g01098 927 Pfam Protein kinase domain 604 868 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01098 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Viun5g01098 927 CDD STKc_IRAK 608 874 - -
Viun5g01098 927 Gene3D - 414 520 IPR038408 -
Viun5g01098 927 Gene3D - 308 406 IPR038408 -
Viun5g01098 927 Gene3D - 60 169 IPR038408 -
Viun5g01098 927 Gene3D - 176 281 IPR038408 -
Viun5g01098 927 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 563 677 - -
Viun5g01098 927 Pfam Salt stress response/antifungal 434 516 IPR002902 -
Viun5g01098 927 Pfam Salt stress response/antifungal 316 403 IPR002902 -
Viun5g01098 927 Pfam Salt stress response/antifungal 192 279 IPR002902 -
Viun5g01098 927 Pfam Salt stress response/antifungal 68 166 IPR002902 -
Viun5g01098 927 SMART serkin_6 602 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01098 Viun-Chr5 7651000 7654940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01098 306 927 Receptor kinase-like Gene Family AT4G05200 42.705 6.04e-169 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g01098 Pkinase 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01098 - - pvu:PHAVU_008G077500g 1378.23