Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01097 ATGATTATTAAGGTTGGATCTTATTTTCCATTACTACGCACAATAAAAAACTATGAACAACAAAAATCTACCCACCGTATGACAGGGTGTTGGAAGATGAACAGAAGCATGACCTGGAATCCCTTCATGCTCATCTTTCTTTTTCTTTCTATTACCTTCTTCCATTTCGCAACTGCTGATCTTGTTTTTCTTCACCGATCTTGTAGTCACGAAAGAAGCAGTGACAACAGCCCCTATCAGACCAAGCTCAAGACCCTCCTCTCTTCCTTATCTTCCAATGCCACACCCAACGCCAACGGATTCTACAACAACACAATCCTCGGCACAAACTCCTCCGACACAGTTTATGGTCTTTTCATGTGCAGAGGTGATGTTCTTTTTGACGAGTGCAGAGATTGCGTTGCAAACGCAACCCACACTCTGTCTTCAGACACAAACTGTTCCTTGTCCAAATCGGGTGTGATTTGGTACGATGAGTGCATGGTTCGGTTTTCCAACAACTCTTTCTTCTCCACTGTGGACACATATCCCAGATATTACAGATGGAACCAGGCCAATATCTCCTCCAACCCATTAAGCTTCAACTATTTGTTAGCCAACACCATGAGAGAAACTGCTCATGAAGCAGCCAATTCAAGTAACAGGTATTCCACAAAGAAAGAAAGCTTATCGGAATTTAATACTCTTTACTGTCTAACTCAGTGCACACAAGACCTTTCACCCCAACAATGCTCAGACTGTCTTGAATCGGCAATATCAGATATTCCATCTTGCTGCGATGGAAAGCAAGGAGGAAGAGTTGTGTATCCCAGTTGTAACATCAGGTATGAATTGTACCCTTTCTACCGTGCCACCGATGAGGGACCAAAAGGACTCGTCCCAGAAACAAAATATGCACAGAGAGATTCTGAATATTCAGAAAATCCTGCTTATATTTCTCACAATTGCTCAAACAACAAAGCTGGCATTGCTTTCCAATCAAACCTCAGAACCCTCCTCTCTGCTTTCTCTTCCAAGGCCACCTCTAGATATGGATTCCAGACGCAAGAGGGAACAGCGTACGGCCTCTTCAGGTGCCGTATCGACATTCCTGCTCGCCTCTGTCAACAATGCATCCAAAACGCAACCGACAGAATAACCTCGGAGTGTGGTTTGGCTTCTGCGGAGGCTGTAATATGGTACAATCACTGCTGGCTTCGCTATTCCGCAAGAAATTTCTTCTCCAGCTACGAAACAAGTCCGAGATTTGGGAATCTTAATATCAGCAACAGCAGTCCGATACAGTCCTCTGTTGCTTCTGAGTTATCGAACCAGTTAGCTAAGGTGGCCAACATGACAGGGAACACTGATAACAAATTCCTAACAGATGAATCTCTGAGATTGAACGATGAGCAAAGAGTGTATATTCTTGGTCAGTGCTCAACGGATCTATCAACCGATGGTTGCAGTGGGTGCCTCAATGATGTGATTGGAACGGCAATTCCATGGAGCAGTTTGGGAAGCGTGGGTGGACGAGTTCTGTATCCTAGCTGTATTCTTCGCTTTGAATTGTTCCAGTTCTACAATCTCACACCTCCTCCTCCACCATCCCCACCAGGTTGGCAAATGCACTCAAAAACGATTATCTTGATTATTACTTCCAGCATAGTTGTATCAGGGGTATTTTTCACCCTTTGTTACTATTTGATACGAAGGAAACCCAGAAAAAATAGTAGAACTATTCTTCAAGAAAATTTTGGACAAGAAAGTTCCACTATAGAGTCATTGCAATTCAATCTGCCAACAATTGAAACAGCAACAAATAATTTCTCGTACGAGAACAAAATTGGCAAAGGTGGATTTGGTGAAGTTTACAAGGGCATTCTTTATGATGGACGATCAATTGCTGTAAAAAGACTTTCAAGAAATTCTAAGCAAGGCATAGAAGAGTTCAAAAATGAAGTTCTATTAATAGCCAAACTTCAACATAGGAATCTAGTAGCATTCATAGGATTTTATCTCGATGAACAAGAAAAAATACTTATCTATGAATATGTGCCAAACAAGAGTCTCGACTACTTTTTATTTGATACTAAACAAGAAAAAGTTTTGAGCTGGAGTGAGCGTCACAATATCATAGGTGGAATTGCTCGAGGAATTCTATATTTACACGAACATTCACGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATGTACTACTAGATGAAAATATGAACCCTAACATTTCAGATTTTGGACTTGCTAGAATTGTTGAAATAGATCAAGAGGAGGAAAGTACCAATAGAATTATTGGAACATATGGGTATATGTCTCCAGAGTATGCTCTCTTTGGACAATTTTCTGAGAAATCTGATGTTTACAGTTTTGGTGTTATGATTCTCGAGATTATTACTGGAAAAAAGAATATAGGTTCATATGAATCACATCGTGTTGCTGATGGTCTTCTAAATTTTGTTTGGAGAAATTGGAGGGATGAAGCAACACTGAACATATTGGACCCAAAATTAAAAGAAAATTATTCTAATGTTGAAGTCATGAGATGCATTCAAATTGGTCTATTATGTGTTCAAGAAAACTCGGACTCGAGACCTACAATGGTAACAATTGCTTCATATCTTAGTAGTCACACTATTGAGTTGCCTTCCCCACAAGAACCAACATTTTTCTTGAACCATATAATGAATCCAATTGTTGCACATGAGTCAAGTTCAGGCCAAGATATCAACTCCATACCATCCTCTATCAATGACATATCTATAAGTGAATTTTATCCTCGATAA 2787 0.4001 MIIKVGSYFPLLRTIKNYEQQKSTHRMTGCWKMNRSMTWNPFMLIFLFLSITFFHFATADLVFLHRSCSHERSSDNSPYQTKLKTLLSSLSSNATPNANGFYNNTILGTNSSDTVYGLFMCRGDVLFDECRDCVANATHTLSSDTNCSLSKSGVIWYDECMVRFSNNSFFSTVDTYPRYYRWNQANISSNPLSFNYLLANTMRETAHEAANSSNRYSTKKESLSEFNTLYCLTQCTQDLSPQQCSDCLESAISDIPSCCDGKQGGRVVYPSCNIRYELYPFYRATDEGPKGLVPETKYAQRDSEYSENPAYISHNCSNNKAGIAFQSNLRTLLSAFSSKATSRYGFQTQEGTAYGLFRCRIDIPARLCQQCIQNATDRITSECGLASAEAVIWYNHCWLRYSARNFFSSYETSPRFGNLNISNSSPIQSSVASELSNQLAKVANMTGNTDNKFLTDESLRLNDEQRVYILGQCSTDLSTDGCSGCLNDVIGTAIPWSSLGSVGGRVLYPSCILRFELFQFYNLTPPPPPSPPGWQMHSKTIILIITSSIVVSGVFFTLCYYLIRRKPRKNSRTILQENFGQESSTIESLQFNLPTIETATNNFSYENKIGKGGFGEVYKGILYDGRSIAVKRLSRNSKQGIEEFKNEVLLIAKLQHRNLVAFIGFYLDEQEKILIYEYVPNKSLDYFLFDTKQEKVLSWSERHNIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMNPNISDFGLARIVEIDQEEESTNRIIGTYGYMSPEYALFGQFSEKSDVYSFGVMILEIITGKKNIGSYESHRVADGLLNFVWRNWRDEATLNILDPKLKENYSNVEVMRCIQIGLLCVQENSDSRPTMVTIASYLSSHTIELPSPQEPTFFLNHIMNPIVAHESSSGQDINSIPSSINDISISEFYPR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01097 928 Gene3D Phosphorylase Kinase; domain 1 565 678 - -
Viun5g01097 928 Pfam Protein kinase domain 605 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01097 928 SUPERFAMILY Protein kinase-like (PK-like) 586 908 IPR011009 -
Viun5g01097 928 ProSiteProfiles Gnk2-homologous domain profile. 175 281 IPR002902 -
Viun5g01097 928 FunFam Cysteine-rich receptor-like protein kinase 25 177 281 - -
Viun5g01097 928 CDD STKc_IRAK 609 875 - -
Viun5g01097 928 ProSiteProfiles Gnk2-homologous domain profile. 61 169 IPR002902 -
Viun5g01097 928 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 61 169 - -
Viun5g01097 928 Gene3D Transferase(Phosphotransferase) domain 1 679 884 - -
Viun5g01097 928 ProSiteProfiles Gnk2-homologous domain profile. 307 406 IPR002902 -
Viun5g01097 928 ProSiteProfiles Gnk2-homologous domain profile. 412 520 IPR002902 -
Viun5g01097 928 Pfam Salt stress response/antifungal 434 516 IPR002902 -
Viun5g01097 928 Pfam Salt stress response/antifungal 316 403 IPR002902 -
Viun5g01097 928 Pfam Salt stress response/antifungal 192 279 IPR002902 -
Viun5g01097 928 Pfam Salt stress response/antifungal 68 166 IPR002902 -
Viun5g01097 928 FunFam cysteine-rich receptor-like protein kinase 10 679 882 - -
Viun5g01097 928 ProSitePatterns Protein kinases ATP-binding region signature. 609 631 IPR017441 GO:0005524
Viun5g01097 928 ProSiteProfiles Protein kinase domain profile. 603 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01097 928 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 354 923 - -
Viun5g01097 928 SMART serkin_6 603 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01097 928 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 564 678 - -
Viun5g01097 928 Gene3D - 414 520 IPR038408 -
Viun5g01097 928 Gene3D - 308 406 IPR038408 -
Viun5g01097 928 Gene3D - 60 169 IPR038408 -
Viun5g01097 928 Gene3D - 176 281 IPR038408 -
Viun5g01097 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01097 Viun-Chr5 7650998 7654940 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01097 306 928 Receptor kinase-like Gene Family AT4G05200 42.705 1.36e-168 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g01097 Pkinase 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01097 - - pvu:PHAVU_008G077500g 1377.84