Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01096 ATGAACAGAAGCATGAGCTGGAATCCCTTCAAGCTCATCCTCCTTTGTGTTACCATCTTCCATTTCGTAACTGGTAAAGCAAAGGGCGCCGACGTTGATTATATTGGCCGCGTTTGCAGTGATCAAGAAAGAAGCAGTGACAACAGCCCGTATCAGACGAACCTCAACACCCTCCTCTCTTCCTTATCTTCCAACGCTACAGCCAATGCCAACGGATTCTACAAAAACACAATCCTTCCCACAAGCTCCTCTGATACAGTATATGGTCTTTTCATGTGCAGGGGTGATGTTCTTTCTGACGCCTGCAAAGATTGTGTCGCAAACGCAACCCACACTCTGTCCTCAGACACAAACTGTTCCTTGTCCAAATCGGGTGTGATTTGGTACGGAGACTGCATGGTTCGGTATTCCAACCGCTCTTTCTTCTCCACTGTGGACACATCTCCCGCATATTGGATGTGGAACGTCGCCAATATCTCCTCAAACCTATCAAGCTTCAACACTTTGTTAGCCGACACCATACGAGAAACTGCTCGTGAAGCAGCCAATTCTAATGAAAGGTATTCCGCGAAGCAACAAAACTTACCGGAATTTCAGACTCTTTACTGTCTAACTCAGTGCACTCAAGACCTTTCACCCCAACAATGCTCAGACTGTCTTGATTCAGCAATATCAGATATTCCATCTTGCTGTGATGGAAAGCAAGGAGGAAGAGTTCTGTATCCCAGTTGTAACATCAGGTATGAATTGTACCCTTTCTACCGCGTCACCGATGAGGGACCGAAAGGACTCGTCCCAGAAACAAAATATGGAAACACAGATTCTGAGTATTCAGAAGATCCTGGCTATATTTCTCACAACTGCTCAAACGACAAAACTGACGCTGCTTTGGAATCAAATCTCAGAACCCTCCTCTCTGGCTTGTCTTCCAACGCCACCTCTAGATATGGATTCCAGACGCAAGAGGGAACAGCGTACGGCCTCTTCAGGTGCCGTATCGACATTCCTGCTCGCCTCTGTCAGCAATGCATCCGAAACGCAACCGACAGAATAACCTCGGAGTGTGGTTTGGCTTCTGCGGAGGCTGTAATATGGTACAATCACTGCTGGCTTCGCTATTCCGACAGAAATTTCTTCTCCAGCTACGAAACAAGTCCGAGATTTAGGAATCTTAATATCAGCAACAGCAGTCCGATACAGTCCTCTGTTGCTTCTGAGTTATCGAACCAGTTAGCTAAGGTGGCCAACATGACAGGGAACACTGATAACAAATTCCTAACAGATGAATCTCTGAGATTGAACGATGAGCAAAGAGTGTATATTCTTGGTCAGTGCTCATCGGGTCTATCAACCGATGGTTGCAGTGGGTGCCTCAATGATGTGATTGGAACGGCAATTCCATGGAGCAGTTTGGGAAGCTTGGGTGGACGAGTTCTGTATCCTAGCTGTATTCTTCGCTTTGAATTGTTCCAGTTCTACGATCTCAAGCCTCCTCCTCCACCATCCCCACCAGATACTAAACAAGAAAAAGTTTTAAGCTGGAGTGAGCGTCACAAAATCATAGGTGGAATTGCTCGAGGAATTGTATATTTACACGAACATTCCCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAACATACTACTAGATGAAAATATGAATCCCAAAATTTCGGATTTTGGACTTGCTAGAATTGTTGAAATAGATCAAGAAGAGGAAAGTACAAATAGAATTATTGGAACATATGGCTATATGTCTCCAGAGTATGCTATGTTTGGACAATTTTCTGAGAAATCTGATGTTTACAGTTTTGGTGTTATGACTCTCGAGATTATCAGTGGGAAAAAGAATATAGGTTCATATGAATCACATCGTGTTGCTGATGGCCTTCTAAATTTTGTTTGGAGACATTGGAGGGATGAAACAACATTGAACACATTGGACCCAAAATTAAAAGAAAATTATTCTAACATTGAAGTCATGAGATGCATTCAAATTGGTTTATTGTGTGTTCAAGAAGATCCAGACGTTAGACCTACAATGGTAGAAATTGTTTCATATCTTAGTAGTCACACAATTGAGTTGCCATCTCCACAAGAACCAACATTTTTATTGAACCATAGAATAAATTCAATTGTTGTCCTTGAATCGAGTTCGGGCCAAGATGGCAGCAGTTCCATACCATCTTCTACCAACAACATATCCATAAGTGAATTTTATCCTAGATAG 2235 0.4282 MNRSMSWNPFKLILLCVTIFHFVTGKAKGADVDYIGRVCSDQERSSDNSPYQTNLNTLLSSLSSNATANANGFYKNTILPTSSSDTVYGLFMCRGDVLSDACKDCVANATHTLSSDTNCSLSKSGVIWYGDCMVRYSNRSFFSTVDTSPAYWMWNVANISSNLSSFNTLLADTIRETAREAANSNERYSAKQQNLPEFQTLYCLTQCTQDLSPQQCSDCLDSAISDIPSCCDGKQGGRVLYPSCNIRYELYPFYRVTDEGPKGLVPETKYGNTDSEYSEDPGYISHNCSNDKTDAALESNLRTLLSGLSSNATSRYGFQTQEGTAYGLFRCRIDIPARLCQQCIRNATDRITSECGLASAEAVIWYNHCWLRYSDRNFFSSYETSPRFRNLNISNSSPIQSSVASELSNQLAKVANMTGNTDNKFLTDESLRLNDEQRVYILGQCSSGLSTDGCSGCLNDVIGTAIPWSSLGSLGGRVLYPSCILRFELFQFYDLKPPPPPSPPDTKQEKVLSWSERHKIIGGIARGIVYLHEHSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVEIDQEEESTNRIIGTYGYMSPEYAMFGQFSEKSDVYSFGVMTLEIISGKKNIGSYESHRVADGLLNFVWRHWRDETTLNTLDPKLKENYSNIEVMRCIQIGLLCVQEDPDVRPTMVEIVSYLSSHTIELPSPQEPTFLLNHRINSIVVLESSSGQDGSSSIPSSTNNISISEFYPR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01096 744 ProSiteProfiles Protein kinase domain profile. 349 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01096 744 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Viun5g01096 744 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 19 257 - -
Viun5g01096 744 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 141 - -
Viun5g01096 744 ProSiteProfiles Gnk2-homologous domain profile. 279 378 IPR002902 -
Viun5g01096 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Viun5g01096 744 Pfam Salt stress response/antifungal 406 488 IPR002902 -
Viun5g01096 744 Pfam Salt stress response/antifungal 288 375 IPR002902 -
Viun5g01096 744 Pfam Salt stress response/antifungal 161 251 IPR002902 -
Viun5g01096 744 Pfam Salt stress response/antifungal 39 138 IPR002902 -
Viun5g01096 744 SMART serkin_6 456 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01096 744 Gene3D Transferase(Phosphotransferase) domain 1 505 699 - -
Viun5g01096 744 ProSiteProfiles Gnk2-homologous domain profile. 384 492 IPR002902 -
Viun5g01096 744 SUPERFAMILY Protein kinase-like (PK-like) 507 714 IPR011009 -
Viun5g01096 744 FunFam Cysteine-rich receptor-like protein kinase 25 149 253 - -
Viun5g01096 744 Pfam Protein kinase domain 508 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01096 744 ProSiteProfiles Gnk2-homologous domain profile. 33 141 IPR002902 -
Viun5g01096 744 Gene3D - 146 253 IPR038408 -
Viun5g01096 744 Gene3D - 281 378 IPR038408 -
Viun5g01096 744 Gene3D - 385 492 IPR038408 -
Viun5g01096 744 Gene3D - 31 141 IPR038408 -
Viun5g01096 744 FunFam cysteine-rich receptor-like protein kinase 10 504 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01096 Viun-Chr5 7641548 7645610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01096 505 744 Receptor kinase-like Gene Family AT4G11530 53.498 1.37e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g01096 Pkinase 1.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01096 - - pvu:PHAVU_008G077500g 819.69