Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01095 ATGAACAGAAGCATGAGCTGGAATCCCTTCAAGCTCATCCTCCTTTGTGTTACCATCTTCCATTTCGTAACTGGTAAAGCAAAGGGCGCCGACGTTGATTATATTGGCCGCGTTTGCAGTGATCAAGAAAGAAGCAGTGACAACAGCCCGTATCAGACGAACCTCAACACCCTCCTCTCTTCCTTATCTTCCAACGCTACAGCCAATGCCAACGGATTCTACAAAAACACAATCCTTCCCACAAGCTCCTCTGATACAGTATATGGTCTTTTCATGTGCAGGGGTGATGTTCTTTCTGACGCCTGCAAAGATTGTGTCGCAAACGCAACCCACACTCTGTCCTCAGACACAAACTGTTCCTTGTCCAAATCGGGTGTGATTTGGTACGGAGACTGCATGGTTCGGTATTCCAACCGCTCTTTCTTCTCCACTGTGGACACATCTCCCGCATATTGGATGTGGAACGTCGCCAATATCTCCTCAAACCTATCAAGCTTCAACACTTTGTTAGCCGACACCATACGAGAAACTGCTCGTGAAGCAGCCAATTCTAATGAAAGGTATTCCGCGAAGCAACAAAACTTACCGGAATTTCAGACTCTTTACTGTCTAACTCAGTGCACTCAAGACCTTTCACCCCAACAATGCTCAGACTGTCTTGATTCAGCAATATCAGATATTCCATCTTGCTGTGATGGAAAGCAAGGAGGAAGAGTTCTGTATCCCAGTTGTAACATCAGGTATGAATTGTACCCTTTCTACCGCGTCACCGATGAGGGACCGAAAGGACTCGTCCCAGAAACAAAATATGGAAACACAGATTCTGAGTATTCAGAAGATCCTGGCTATATTTCTCACAACTGCTCAAACGACAAAACTGACGCTGCTTTGGAATCAAATCTCAGAACCCTCCTCTCTGGCTTGTCTTCCAACGCCACCTCTAGATATGGATTCCAGACGCAAGAGGGAACAGCGTACGGCCTCTTCAGGTGCCGTATCGACATTCCTGCTCGCCTCTGTCAGCAATGCATCCGAAACGCAACCGACAGAATAACCTCGGAGTGTGGTTTGGCTTCTGCGGAGGCTGTAATATGGTACAATCACTGCTGGCTTCGCTATTCCGACAGAAATTTCTTCTCCAGCTACGAAACAAGTCCGAGATTTAGGAATCTTAATATCAGCAACAGCAGTCCGATACAGTCCTCTGTTGCTTCTGAGTTATCGAACCAGTTAGCTAAGGTGGCCAACATGACAGGGAACACTGATAACAAATTCCTAACAGATGAATCTCTGAGATTGAACGATGAGCAAAGAGTGTATATTCTTGGTCAGTGCTCATCGGGTCTATCAACCGATGGTTGCAGTGGGTGCCTCAATGATGTGATTGGAACGGCAATTCCATGGAGCAGTTTGGGAAGCTTGGGTGGACGAGTTCTGTATCCTAGCTGTATTCTTCGCTTTGAATTGTTCCAGTTCTACGATCTCAAGCCTCCTCCTCCACCATCCCCACCAGGTGAAAGTCGGTCAAGAACAATTATCTTGATCATTACTTCCAGCATAGTAGTATCAGGAATACTTTTCACCTTTTGTTATTATTTTATACGAAGAAAGAACAGAAAAGATAATAGAACTATTCTTCAAGAAAATTTTGGACAACAAAGTTCAACTATAGAATCTTTGCAATTCAATATGCCAATAATCGAAGCGGCAACAAATAACTTCTCACATGACAACAAAATCGGAAAAGGTGGATTTGGAGAAGTTTACAAGGGAATTCTTTATGATGGACGATCCATCGCTGTGAAGAGACTTTCAAAAAATTCTAGACAAGGCATACAAGAGTTTAAAAATGAGGTTCTATTGATAGCCAAACTTCAACATAGAAATTTAGTGGCTTTCATAGGATTTTGTCTTGATGAACAAGAAAAAATACTTATCTATGAATATGTACCAAACAAGAGTCTAGACTACTTCTTATTTGATACTAAACAAGAAAAAGTTTTAAGCTGGAGTGAGCGTCACAAAATCATAGGTGGAATTGCTCGAGGAATTGTATATTTACACGAACATTCCCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAACATACTACTAGATGAAAATATGAATCCCAAAATTTCGGATTTTGGACTTGCTAGAATTGTTGAAATAGATCAAGAAGAGGAAAGTACAAATAGAATTATTGGAACATATGGCTATATGTCTCCAGAGTATGCTATGTTTGGACAATTTTCTGAGAAATCTGATGTTTACAGTTTTGGTGTTATGACTCTCGAGATTATCAGTGGGAAAAAGAATATAGGTTCATATGAATCACATCGTGTTGCTGATGGCCTTCTAAATTTTGTTTGGAGACATTGGAGGGATGAAACAACATTGAACACATTGGACCCAAAATTAAAAGAAAATTATTCTAACATTGAAGTCATGAGATGCATTCAAATTGGTTTATTGTGTGTTCAAGAAGATCCAGACGTTAGACCTACAATGGTAGAAATTGTTTCATATCTTAGTAGTCACACAATTGAGTTGCCATCTCCACAAGAACCAACATTTTTATTGAACCATAGAATAAATTCAATTGTTGTCCTTGAATCGAGTTCGGGCCAAGATGGCAGCAGTTCCATACCATCTTCTACCAACAACATATCCATAAGTGAATTTTATCCTAGATAG 2703 0.4095 MNRSMSWNPFKLILLCVTIFHFVTGKAKGADVDYIGRVCSDQERSSDNSPYQTNLNTLLSSLSSNATANANGFYKNTILPTSSSDTVYGLFMCRGDVLSDACKDCVANATHTLSSDTNCSLSKSGVIWYGDCMVRYSNRSFFSTVDTSPAYWMWNVANISSNLSSFNTLLADTIRETAREAANSNERYSAKQQNLPEFQTLYCLTQCTQDLSPQQCSDCLDSAISDIPSCCDGKQGGRVLYPSCNIRYELYPFYRVTDEGPKGLVPETKYGNTDSEYSEDPGYISHNCSNDKTDAALESNLRTLLSGLSSNATSRYGFQTQEGTAYGLFRCRIDIPARLCQQCIRNATDRITSECGLASAEAVIWYNHCWLRYSDRNFFSSYETSPRFRNLNISNSSPIQSSVASELSNQLAKVANMTGNTDNKFLTDESLRLNDEQRVYILGQCSSGLSTDGCSGCLNDVIGTAIPWSSLGSLGGRVLYPSCILRFELFQFYDLKPPPPPSPPGESRSRTIILIITSSIVVSGILFTFCYYFIRRKNRKDNRTILQENFGQQSSTIESLQFNMPIIEAATNNFSHDNKIGKGGFGEVYKGILYDGRSIAVKRLSKNSRQGIQEFKNEVLLIAKLQHRNLVAFIGFCLDEQEKILIYEYVPNKSLDYFLFDTKQEKVLSWSERHKIIGGIARGIVYLHEHSRLKVIHRDLKPSNILLDENMNPKISDFGLARIVEIDQEEESTNRIIGTYGYMSPEYAMFGQFSEKSDVYSFGVMTLEIISGKKNIGSYESHRVADGLLNFVWRHWRDETTLNTLDPKLKENYSNIEVMRCIQIGLLCVQEDPDVRPTMVEIVSYLSSHTIELPSPQEPTFLLNHRINSIVVLESSSGQDGSSSIPSSTNNISISEFYPR 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01095 900 Gene3D Transferase(Phosphotransferase) domain 1 650 855 - -
Viun5g01095 900 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Viun5g01095 900 FunFam Cysteine-rich receptor-like protein kinase 25 149 253 - -
Viun5g01095 900 ProSiteProfiles Gnk2-homologous domain profile. 147 253 IPR002902 -
Viun5g01095 900 Gene3D Phosphorylase Kinase; domain 1 535 649 - -
Viun5g01095 900 Gene3D - 385 492 IPR038408 -
Viun5g01095 900 Gene3D - 281 378 IPR038408 -
Viun5g01095 900 Gene3D - 31 141 IPR038408 -
Viun5g01095 900 Gene3D - 147 253 IPR038408 -
Viun5g01095 900 ProSiteProfiles Protein kinase domain profile. 574 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01095 900 FunFam cysteine-rich receptor-like protein kinase 10 650 853 - -
Viun5g01095 900 ProSiteProfiles Gnk2-homologous domain profile. 279 378 IPR002902 -
Viun5g01095 900 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 535 649 - -
Viun5g01095 900 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 141 - -
Viun5g01095 900 SMART serkin_6 574 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01095 900 ProSiteProfiles Gnk2-homologous domain profile. 384 492 IPR002902 -
Viun5g01095 900 CDD STKc_IRAK 580 846 - -
Viun5g01095 900 SUPERFAMILY Protein kinase-like (PK-like) 557 870 IPR011009 -
Viun5g01095 900 ProSiteProfiles Gnk2-homologous domain profile. 33 141 IPR002902 -
Viun5g01095 900 Pfam Protein tyrosine and serine/threonine kinase 577 846 IPR001245 GO:0004672|GO:0006468
Viun5g01095 900 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 160 896 - -
Viun5g01095 900 Pfam Salt stress response/antifungal 39 138 IPR002902 -
Viun5g01095 900 Pfam Salt stress response/antifungal 406 488 IPR002902 -
Viun5g01095 900 Pfam Salt stress response/antifungal 288 375 IPR002902 -
Viun5g01095 900 Pfam Salt stress response/antifungal 161 251 IPR002902 -
Viun5g01095 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01095 Viun-Chr5 7641547 7645610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01095 278 900 Receptor kinase-like Gene Family AT4G05200 43.161 1.71e-169 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g01095 PK_Tyr_Ser-Thr 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01095 - - pvu:PHAVU_008G077500g 1417.91