Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01067 ATGAGCATGAGCAGTGGTAGTGGCGGCAGCGGCGGTGGCAGCAGTACTGGTAGCCCTTGTGGGGCTTGCAAGTTCCTCAGGAGGAAATGCATTCCGGGTTGTATCTTTGCTCCGTATTTTGATGCGGAACAAGGTACAACCCATTTTGCCACTGTGCACAAGGTTTTTGGGGCTAGCAACGTGTCCAAGCTTCTCCTTAGCATTCCTGTGCATAAGAGGCTTGATGCTGTCATCACCATTTGTTATGAAGCACAATCACGCCTCAGAGATCCTGTTTACGGCTGTGTTTCGCACATCTTTGCCCTTCAGCAACAGGTGGTGAGCTTGCAAGCAGAACTCTCATACCTACAAGGCCACCTTGCCCAGATGGAGGTACCTCATCCGCCGCAACCTCCTCCGTCTCAACCGGCGACGGCACTGCGATTCTCAATGGCTGATTTGCCGTCGGCGGCGACCGGAGTGATGGCGCCGGCCACCACTTATGACTTGTCTTCACTTTTTGATCCGACGGGGCAAATTTCATGGGCCATGCAACATAGGGCCATTGACCCACGTCAATACGTGGCTGCTCCTCCGTCAAGTTCTACTAGGGCTGACGTGGAAGCAGTGGCACGTGACCTTCCTCGTAGGCACGGGTCTCCACCATCACCTCCTGCTTCAAGCTCCAATGCTTCACCATCTCTATCTCTTTCCAAATGA 699 0.5365 MSMSSGSGGSGGGSSTGSPCGACKFLRRKCIPGCIFAPYFDAEQGTTHFATVHKVFGASNVSKLLLSIPVHKRLDAVITICYEAQSRLRDPVYGCVSHIFALQQQVVSLQAELSYLQGHLAQMEVPHPPQPPPSQPATALRFSMADLPSAATGVMAPATTYDLSSLFDPTGQISWAMQHRAIDPRQYVAAPPSSSTRADVEAVARDLPRRHGSPPSPPASSSNASPSLSLSK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01067 232 MobiDBLite consensus disorder prediction 186 232 - -
Viun5g01067 232 PANTHER LOB DOMAIN CONTAINING PROTEIN 15 136 - -
Viun5g01067 232 Pfam Lateral organ boundaries (LOB) domain 19 117 IPR004883 -
Viun5g01067 232 ProSiteProfiles LOB domain profile. 18 120 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01067 Viun-Chr5 7439348 7443189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01067 22 232 AS2 family AT2G45420 57.080 3.89e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Viun5g01067 LOB 4.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01067 K21994 - gmx:100790517 311.227