Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01041 ATGACGGTTAGCCCGAAATCTTTTCCCGGAACACAACTTCCTTCCTCTTCATATTCATCTTTGGATTTTCGTTTTTCTCTCAAATCTTTGTTCAACATTGTTGGTCTGCTCACCCTCGTTGCTCCTCAAGCCAACAGTGGTTTGCTCGATGTCGTTGGTGCTCCGCTGTACTCTGCTCGTTCTTGGCATTGTTGGATCTACTTTGCTGACCCTACTTATGCTAGATTTGTTCTTCTCATTGCTTCGTTGCTACATATGCTCTGTTCGTCGTCACCGTTGCTGGATTTGCTTCGCTTGTCGCCGCCACTGTTGGATTTACTATGCTCGTCGTCGCCGCTGCTGGATCAGCTATGTTCATCGCCGTTGTTGCTAGATCTGATCCTCTCATCATCATCATCGTCACTGGATTTGCTTGTTCGTCGTCACTGGATCTACTCGTTCGTCATCACCACTGGATCTGCTTTGTTCGTCGTCCCTACTCTGCCTGTCGTTGCTGCTCTGTTCGATGTCGTTGTTGTTCCATTCGACATCGCTGCTACTCTGTTCAACGTCATTGCTGCTTTTTTCATCATAAGTGCTATAATTTTTCCCTCCACTTTGCTAATTCTTAGTTTCCACTCACTCACTGTCCAAATTAAACCCTATTTCCATCAGGGCTTCCTCTTCTGGACTCCATCACCACTGATTGTGAAACCCTTCACACCGTCCATCATCAATCGCACACCGTCTCACGGCCATCGACTTACCACCGTGCTCGTCGCGCCGTCATCACTTCCGGTGGTCGTCGCGCTGTCATCACTTCCCGTGGTCGTCACGCGATTCACCCTCGTTGTCGAGCCGTATCAGTTCACCTTCGTCGTCGCCCCGTCGTCAGTTCTCTTCGTCGCCGCGCCGTCATCGGTTCACTTTCATCGTCGCGCAGTCATCGGCGTGTCTATGTTCTCTGGGAAAATGGATCCTTATGTGATTCTCACTTATCGCAATCAGGAGCACCGAAGCACTGTGGCTAAAGGTGCAGGGTCTAAACCCCATTGGAATGAAAGCTTTCTTTTCACTATTTGTGACAGTGCCACTGAACTTAATCTGAGGCTAATGGACAAGGATACGTTTACTAGTGATGATTTCCTTGGCGAGACAAGAATTAATCTGGAAGGCGTGTTGAATGTGGGGAGCATTCCAGAAACTTCTTACAATGTTGTGAAGAACCAAAACTACTGTGGGGAGCTTAAAGTGGCACTCACCTTTAATCCTGAGATATGCTACTGA 1266 0.481 MTVSPKSFPGTQLPSSSYSSLDFRFSLKSLFNIVGLLTLVAPQANSGLLDVVGAPLYSARSWHCWIYFADPTYARFVLLIASLLHMLCSSSPLLDLLRLSPPLLDLLCSSSPLLDQLCSSPLLLDLILSSSSSSLDLLVRRHWIYSFVITTGSALFVVPTLPVVAALFDVVVVPFDIAATLFNVIAAFFIISAIIFPSTLLILSFHSLTVQIKPYFHQGFLFWTPSPLIVKPFTPSIINRTPSHGHRLTTVLVAPSSLPVVVALSSLPVVVTRFTLVVEPYQFTFVVAPSSVLFVAAPSSVHFHRRAVIGVSMFSGKMDPYVILTYRNQEHRSTVAKGAGSKPHWNESFLFTICDSATELNLRLMDKDTFTSDDFLGETRINLEGVLNVGSIPETSYNVVKNQNYCGELKVALTFNPEICY 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01041 421 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 314 417 IPR035892 -
Viun5g01041 421 ProSiteProfiles C2 domain profile. 279 396 IPR000008 -
Viun5g01041 421 Pfam C2 domain 315 390 IPR000008 -
Viun5g01041 421 PANTHER C2 DOMAIN-CONTAINING 313 416 - -
Viun5g01041 421 SMART C2_3c 300 395 IPR000008 -
Viun5g01041 421 Gene3D C2 domain 302 418 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01041 Viun-Chr5 7099927 7115424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01041 319 384 C2H2 Transcription Factor Family AT4G21160 37.879 8.32e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01041 - - vun:114183197 698.738