Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01035 ATGCAAAACTCTAGCGAAAATTCTCCAGCTTCCCCTGGGCCGGTGGACCCGGTGCCGTTCCTCCCACAGAGCCGCCAAGTCGCCCGCCGTGCTCCACTGCGGACGGCGGCGAGGTTCTTCCGGCGCGCGAGCGGGCGGCGCCTTATGCTGGGAGAGGCTTCGGTGCGCGTGCGGGAAGCGGCTGCGGCCGAGGTGGAGGAGCGGCAGAGCGAGTGGGCGTACTCGCGGCCGGTGGTGGCGGTGGACGTCCTGTGGAACACGGCGTTTCTGGTGATCGGCGCGTCGGTGCTGTGGCGGAGCGCTGCGGAGGAGCCGAGCGTTCCTCTCAGGACGTGGATTTTGGGGTATTTGGTGCAGGGCATGGTCCACTCTCTCTGCGTCCTGGTTGAGTTCCGAAGGAGAATGATGAGTGGGAACAATTTCCGTTCCAATGTGCCAAACCATGTTCAATGGAGCTTCAGTTCTGACAGTGACCAAGAGTTTTATTATTACGAATCCTCTCTGCAGGGTGATGAAAACAGCATCATAAAACACATAGAGTCAGCAAATACCATGCTTTCATTCATATGGTGGACTGTTGGAGTCTACTGGGTAACTCTTGGTGGCCAGAGTTTGACAACGGATGCACCTCAACTTTACTGGGTCTGTATCGCATTTCTTTCTTTCGACGTTGTGATTGTACTGATCTGTGTTGCTGTTGCATGCCTTATTGGTATTGCTGTTTGCTGTTGTCTACCATGCATCCTTGCTCTCCTGTACGCAGTCACAGATCAGGAAGGGGCAACGAAGGAAGAGATTGACCAGTTGCCAAAATATAAGTTCAGAATAATAAAAGAAGGTGATATTGAAGAATCTTCAAGAGGAATAATGATCGAATCTGAGACTGGGACAGCCACCGAACATGTTGTTGCCTTAGAGGATGCAGAATGCTGTATCTGTCTCTCGCCATATGATGATGGTGCTGAAATCAGAGAACTTCCTTGCAACCACCGTTTTCATTGCGCTTGCATAGACAAATGGCTGCTAATCAATGCTACCTGCCCTCTCTGCAAGCTTGACATTTTGGTTGGCAACCACCATCATGAAGTTTGA 1092 0.5211 MQNSSENSPASPGPVDPVPFLPQSRQVARRAPLRTAARFFRRASGRRLMLGEASVRVREAAAAEVEERQSEWAYSRPVVAVDVLWNTAFLVIGASVLWRSAAEEPSVPLRTWILGYLVQGMVHSLCVLVEFRRRMMSGNNFRSNVPNHVQWSFSSDSDQEFYYYESSLQGDENSIIKHIESANTMLSFIWWTVGVYWVTLGGQSLTTDAPQLYWVCIAFLSFDVVIVLICVAVACLIGIAVCCCLPCILALLYAVTDQEGATKEEIDQLPKYKFRIIKEGDIEESSRGIMIESETGTATEHVVALEDAECCICLSPYDDGAEIRELPCNHRFHCACIDKWLLINATCPLCKLDILVGNHHHEV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01035 363 MobiDBLite consensus disorder prediction 1 21 - -
Viun5g01035 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 355 IPR013083 -
Viun5g01035 363 SMART ring_2 310 350 IPR001841 -
Viun5g01035 363 Pfam Ring finger domain 309 351 IPR001841 -
Viun5g01035 363 PANTHER TARGET OF ERK KINASE MPK-1 49 354 - -
Viun5g01035 363 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Viun5g01035 363 SUPERFAMILY RING/U-box 291 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01035 Viun-Chr5 6973200 6977328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01035 7 361 C3H Transcription Factor Family AT1G68070 46.944 1.78e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01035 - - gmx:100795425 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01035 5 6973200 6977328 Viun5g01035 5 6973200 6977328 ECH