Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00988 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCAAAACGAGGGTTTGGCATCTTTTTTGAAAAGGATGTTTCTGATGCGCTGGTCCTGCCTTTGAAGCTAAAGAAATGGCCATCTGCAGAAAAGGAAAATATTTTAGGGGTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTCCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGATGACAGGTTACTAATGATACTGTTATTGACTGTGGAGCGGTTGCGTAAGAATTCTCTATGGAAGCCGTACCTCGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAACTAAGAGGAACAACATTATATCGTGCGACTGAATTGCAGAAGAAGAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCCGAGATTGAGGTATCCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGACCCGTGCTTTGAACATTCCAATGCCTCGATCTTATGTATTTCCAGAAATGCAAGATGATCATGAGAGTTGCATTCCTGAAGCTGATGAAAAAAGAAGCCAGGTTAAAAAATCTAACAATCTGACAACGAAAGAGACATGTAACAGTTGCACAGTGACAGGAGAAACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCGATAGCAACGTGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTACCTTTCTCCATGTATCTTATTTTGGCTGCTCAAAGTCACTTGCAAAATGACCAAGAAATTTCTATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGAGAACACAGATGACTATGTCATGGTCCACTATCCAACAGAAGCAATGAGTACTATTTCCTTTTCAGAGTCCAAAGGACAGCTTCTCGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACACAAAACGTTTCTGGATAATGGGTTTTTTCCGTTAGGGACCCAAATCAGTGGAGAAGATAAAAAGGGAAAAGCTGAACAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCTTACGCAAACAAGCTAGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTGTGTGGTGATTCTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGAATCTTGAAGAGAGTTCTGGACCAGATGAAGATGACCTTGATTTACTCAGGAAAGCCCTTATTATTGATGAACATGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGACAAATGACTCAGAGGAACCAAAGTTGATGACCAGAAACAAGTGGTCTGCTATAGTATATAGGCGTGGACAGAAAGAGCTAACAAGGTTATTCCTGAAAGAAGCAGAACATGCTTTGCAGTTATCACTCAATGAAGAAGAAGTGACTTCTTGCTAA 1743 0.4108 MASPEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFFEKDVSDALVLPLKLKKWPSAEKENILGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMILLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDIVKKLLTLDGNSEIEVSFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHESCIPEADEKRSQVKKSNNLTTKETCNSCTVTGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLILAAQSHLQNDQEISISYGNKGNEELLYLYGFVIDENTDDYVMVHYPTEAMSTISFSESKGQLLEVQNAEMRCLLHKTFLDNGFFPLGTQISGEDKKGKAEQVCNYSWSGQRKMPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEELAGPERERELSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMNLEESSGPDEDDLDLLRKALIIDEHEDSKQCTSNLSTKTNDSEEPKLMTRNKWSAIVYRRGQKELTRLFLKEAEHALQLSLNEEEVTSC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00988 580 Pfam SET domain 102 319 IPR001214 GO:0005515
Viun5g00988 580 CDD SET_LSMT 69 333 - -
Viun5g00988 580 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 507 - -
Viun5g00988 580 Gene3D set domain protein methyltransferase, domain 1 5 333 - -
Viun5g00988 580 SUPERFAMILY SET domain 8 337 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00988 Viun-Chr5 6472832 6479893 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun5g00988 SET 7.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00988 - - vun:114183365 1170.61