Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00987 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCAAAACGAGGGTTTGGCATCTTTTTTGAAAAGGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCCATTACTCCAATGAGGGTGTTGCAAGATCCTCTCCTAGGACCAGCATGTAGAGCAATGTTTGAAGAAGGAGATGTAGATGACAGGTTACTAATGATACTGTTATTGACTGTGGAGCGGTTGCGTAAGAATTCTCTATGGAAGCCGTACCTCGATATGCTTCCAACCACTTTTGGGAATCCACTTTGGTTTAGTGATGATGAACTTCAAGAACTAAGAGGAACAACATTATATCGTGCGACTGAATTGCAGAAGAAGAGCCTGCTTTCTCTGTATGAAACTAAAGTGAAGGATATAGTGAAGAAACTTTTGACTCTTGATGGAAATTCCGAGATTGAGGTATCCTTTGAAGATTTCCTTTGGGCGAATTCAGTATTTTGGACCCGTGCTTTGAACATTCCAATGCCTCGATCTTATGTATTTCCAGAAATGCAAGATGATCATGAGAGTTGCATTCCTGAAGCTGATGAAAAAAGAAGCCAGGTTAAAAAATCTAACAATCTGACAACGAAAGAGACATGTAACAGTTGCACAGTGACAGGAGAAACTGTTTGGGTAGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCGATAGCAACGTGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTACCTTTCTCCATGTATCTTATTTTGGCTGCTCAAAGTCACTTGCAAAATGACCAAGAAATTTCTATTAGTTATGGAAACAAGGGAAATGAGGAACTTCTATATCTGTATGGTTTTGTCATTGATGAGAACACAGATGACTATGTCATGGTCCACTATCCAACAGAAGCAATGAGTACTATTTCCTTTTCAGAGTCCAAAGGACAGCTTCTCGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACACAAAACGTTTCTGGATAATGGGTTTTTTCCGTTAGGGACCCAAATCAGTGGAGAAGATAAAAAGGGAAAAGCTGAACAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAGATGCCATCTTACGCAAACAAGCTAGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGAAGAGCTTTACAAGGTTTCATCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGAGAACTATCAGATACAGATGTCCAATCAGCAGTATGGGAGGTGTGTGGTGATTCTGGAGCTTTACAATTGCTTGTTGATCTTCTTCGTGTGAAGATGATGAATCTTGAAGAGAGTTCTGGACCAGATGAAGATGACCTTGATTTACTCAGGAAAGCCCTTATTATTGATGAACATGAAGATAGCAAACAATGCACGAGCAATTTAAGCACAAAGACAAATGACTCAGAGGAACCAAAGTTGATGACCAGAAACAAGTGGTCTGCTATAGTATATAGGCGTGGACAGAAAGAGCTAACAAGGTTATTCCTGAAAGAAGCAGAACATGCTTTGCAGTTATCACTCAATGAAGAAGAAGTGACTTCTTGCTAA 1683 0.4106 MASPEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFFEKDVSDGVMLVVPLDLAITPMRVLQDPLLGPACRAMFEEGDVDDRLLMILLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDIVKKLLTLDGNSEIEVSFEDFLWANSVFWTRALNIPMPRSYVFPEMQDDHESCIPEADEKRSQVKKSNNLTTKETCNSCTVTGETVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLILAAQSHLQNDQEISISYGNKGNEELLYLYGFVIDENTDDYVMVHYPTEAMSTISFSESKGQLLEVQNAEMRCLLHKTFLDNGFFPLGTQISGEDKKGKAEQVCNYSWSGQRKMPSYANKLVFPEKFMTTLRTIAMQEEELYKVSSMLEELAGPERERELSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMNLEESSGPDEDDLDLLRKALIIDEHEDSKQCTSNLSTKTNDSEEPKLMTRNKWSAIVYRRGQKELTRLFLKEAEHALQLSLNEEEVTSC 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00987 560 CDD SET_LSMT 32 313 - -
Viun5g00987 560 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 487 - -
Viun5g00987 560 SUPERFAMILY SET domain 8 317 IPR046341 -
Viun5g00987 560 Pfam SET domain 81 299 IPR001214 GO:0005515
Viun5g00987 560 Gene3D set domain protein methyltransferase, domain 1 5 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00987 Viun-Chr5 6472822 6479893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00987 8 324 NAC Transcription Factor Family AT3G56570 24.348 5.99e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun5g00987 SET 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00987 - - vun:114183365 1119.76