Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00897 ATGGCTAAGAGGTCACAAAGATTCCCTGTGAATTATGAGAAAGACCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCTCGATTTACTCGGAAGTTGATAGCAGATAAGAGGCATGCAAGCAAGCATGCTTTTGGTGCGGCTGCACTTACCAAGAACAAGTTTGAAGTGCTGAGCAATTTGGATGAAAACTATGAAGGCAATTTTGACAGGGGAGAGAGTAAGAGACTAACACTGACAACTGATGCTGAAAAGCTTAGTGTGAAGAAACTTATAGAAGAAGAAATGATCACTGACCAAGATGAAATAAAGGATCAAGGTAACGCGGAAATGGAATCAAAGCAATCCAGATTAGGGTGTAACGACCCCCAGAAGAAAGATTCCAAAAGAAAGAAGAAATCTCGCAAGAAAAGCCATGATTTGAATTCAGATGCAACCTTGAAATCAGAGTTTTCACATAAGCAGCATTCAAGGGAGCAGTCAAAAGATACTATAGATTTGGAAAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGTTTGACAATGATGGCAAAATTGAAGCGCAGTCAAACCAAAAGAATGTTATGTCTGAAAACCTTGCTAATGCAATCCATGAATTTATGAACCAGATGAAATTGAATGGGAAAGATCTGCATGAAGATGGACAATTCCTCAGCTCACGTGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTCCTTAAACTTTTACAAGATCCAAATTCGCACTTGCTGAAGTACATTCAGGAGTTGGAAAATGCTCCAGGGAGAGATGGCAAAGAATGCAGTTCACTTACTGCCTCCAACCGCTCTGAACTAGAACTTGTTAGTCTAAAACAAACTAGGGAGAATACCAACCGAAAGCATCTTAACTTTTTCAGGAAAAGGGGGAAGTCTCAATCAAAAGATCTGACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACAGGCATGCAAATTTCTGAAAGTGAAAACAACCTTGCCTCATTGCTAGATTCTCGTGATGTTGCCCCTTACAAAGGTCCTTCTGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAGATAAAAAGGAAACTGAAACATGCCATGGGCAAGGAGAGGCATGGAAACCCTGAAGTAGTCCCACGAAAGCTCCCTGTTGAACGTCAAAATAAGTTGCAAAGAGGCAAATGCAAAGATAATGCTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAGGTTGCAAGACCAATGTTTGATGTTATGAAGGGAAACAGGACTGATACATTGAAAGACTCTGAAGTGAACGCAGAACAAGAAAGTGGTATTCCCAAGTTAAGTGCTTCTAACTTATATGTTGAGGCAAGGAAACATTTATGTGAGATGCTAGATAATGGTGATGAAAACACAAACATTTCAAGCAGGCAGATTCCCAAAACCCTTGGGAGAATACTTTCCCTTCCTGAGTACAACTTTTCACCTGTAGAAAGTCCTGGAAGGGATTTGGAGCATCATTCTGTGACTGCACAGGCAGTATCTTCTCCCTCAGGAAAAACTAGGGAAGTTAGTGAGGATATTTGCTCCCCAGAACCAGCAATCACAGTTGGTTTTCCAGCTCAGGAAACTAACAATTCAGAAGATAAGTCATGCGTTTGTGATGAAATCTCTAATAATAAAGTACAAGAAATTAAGCCAGTGTCAAATTTCTCCAATGGGGTTGGTCCTGTTGATACATCTGAAGTCTGTTGTCCTATTAGAGATGAGACAGTCACCGAAGATAATGTTGAATCTGCAGAAGAGAAATATGTATTGGAATCAGATCCAAATGGCTTCATCTTAGGAAAGGACCAGAAAATTGATATCTCAGAAACTCCTGATGGTGCAAGATGTTCTGGATGTTTGCATCAGGATGAGGATTTAACAGAAGAGAACCAACTATCATCTCTACCGTCGTCTCCTCACTCTTCTATTTCTAAGAAAAATGAAGAGCTAGAATGCAGGATAGAGTTATCTGGGAGACCGAGTCCTGTATCTGTTCTTGATACATCATTTTCAGATGATGACTCTGCACACTCCACATGTCAACCTGTTAACTTGCCAGTACAACCTCTACATATTCAATTTGAAGAACACGAGTCTTCTTCACCTGCAGAACAATTTGACACAGGAAAATATAGTTTTGGAGAAAATGAATTGATATATGACTACATCAAAGTTGTCTTGCATGCCTCTGGTTTGACAAGAGATCAGTTGTTGGTGAAATGCCTTACCTCTGACAAAATACTAGATCCTTCCCTCTTTGATCAGATAGAGTTCTTCTCCAACCTTCTTTGCCATGATCAGAAGCTCCTATTTGACTCTATCAATGAGGTTCTGATGGAGGTTTGTCAACATTATTTTGGGGTCTCACCTTGTGTTTCATTAGTAAATCCTTGCATGATGCCAGCTCCAAGTATGAAAAGGCTTACTTTCAAGGTCTGGGAAGGAGTGTGCTGGCATGTCCTTCCCTTGCCCCCACCACGCACTTTAGAGCAAATTGTTAAGAAAGACATGGCAAGAAAGGGATCTTGGATGGACCTTGAACTAGATGCTGAAACAATTGGTTTTGAAATGGGGGAGGCCATTCTTACTGAACTGATGGAAGACACAATTTTGAGCCTTGTGAGTGAAAGTTCTGTGAGTTTTTAA 2766 0.3973 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHASKHAFGAAALTKNKFEVLSNLDENYEGNFDRGESKRLTLTTDAEKLSVKKLIEEEMITDQDEIKDQGNAEMESKQSRLGCNDPQKKDSKRKKKSRKKSHDLNSDATLKSEFSHKQHSREQSKDTIDLEKIMDDFCHVEAACSMMFDNDGKIEAQSNQKNVMSENLANAIHEFMNQMKLNGKDLHEDGQFLSSRELMEALQVISSDKQLFLKLLQDPNSHLLKYIQELENAPGRDGKECSSLTASNRSELELVSLKQTRENTNRKHLNFFRKRGKSQSKDLTNENGKTEFSNRIVILKPALTGMQISESENNLASLLDSRDVAPYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVVPRKLPVERQNKLQRGKCKDNAGMRSPNKDHFFIEKVARPMFDVMKGNRTDTLKDSEVNAEQESGIPKLSASNLYVEARKHLCEMLDNGDENTNISSRQIPKTLGRILSLPEYNFSPVESPGRDLEHHSVTAQAVSSPSGKTREVSEDICSPEPAITVGFPAQETNNSEDKSCVCDEISNNKVQEIKPVSNFSNGVGPVDTSEVCCPIRDETVTEDNVESAEEKYVLESDPNGFILGKDQKIDISETPDGARCSGCLHQDEDLTEENQLSSLPSSPHSSISKKNEELECRIELSGRPSPVSVLDTSFSDDDSAHSTCQPVNLPVQPLHIQFEEHESSSPAEQFDTGKYSFGENELIYDYIKVVLHASGLTRDQLLVKCLTSDKILDPSLFDQIEFFSNLLCHDQKLLFDSINEVLMEVCQHYFGVSPCVSLVNPCMMPAPSMKRLTFKVWEGVCWHVLPLPPPRTLEQIVKKDMARKGSWMDLELDAETIGFEMGEAILTELMEDTILSLVSESSVSF 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00897 921 MobiDBLite consensus disorder prediction 667 686 - -
Viun5g00897 921 MobiDBLite consensus disorder prediction 669 683 - -
Viun5g00897 921 MobiDBLite consensus disorder prediction 143 170 - -
Viun5g00897 921 MobiDBLite consensus disorder prediction 104 170 - -
Viun5g00897 921 Pfam Domain of unknown function (DUF4378) 761 908 IPR025486 -
Viun5g00897 921 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 913 - -
Viun5g00897 921 MobiDBLite consensus disorder prediction 522 549 - -
Viun5g00897 921 MobiDBLite consensus disorder prediction 533 547 - -
Viun5g00897 921 Pfam Protein of unknown function (DUF3741) 219 263 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00897 Viun-Chr5 5641467 5647774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00897 1 896 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.427 4.00e-95 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00897 5 5641467 5647774 Viun5g00897 5 5641467 5647774 ECH
Viun5g00897 5 5641467 5647774 Viun10g01909 10 33811981 33818129 PCT