Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00843 ATGGCCACGGCTCCTTCGCTTCTACACTCATCCGGATCCTCATTTTTCGCTCAATTTCGTGCCTTTCCACACTCTTCTTCCTCTTCAGTGTTCCCTCATGTAAAAAGACATGGGAATGTGGTGGTGCCTGTGAGGGCCTCTGATTCTGGGGTTGTGTTGGTGGAGAAGTCTGACGCAGAGAAGACATACAGGCTCAAAACAGCATACACTGAGAAAATCGTTCCCTTGCTCATAGAAGAGTTCTCTTACACCAACAAGCACCAGGTGCCTAAAATTGAGAAGATTGTGGTTAACTGTGGTATTGGAGACGCTGCACAAAATTCCAAGGGTTTGGATGCGGCAATAAGTGATCTAGCAATGATCACAGGGCAGAGACCTGTGAAGACTCGGGCTAGGGCTTCTCTTGCCACCTTTAAGATCAGGGAAGGTCAACCGCTTGGGATTGCTGTGACACTAAGAGGAAACATTATGTACTCATTCCTCGACCGAGTCATCAACTTGGGACTTCCCAGAACAAGAGATTTCCAAGGTGTGAACTCTAACAGCTTTGATGGACATGGAAATTACAGCATTGGTGTGAAGGACCAGGGTGTGTTCCCAGAGATCAGAGCTGATGTTGTTGGCAAGCCTAGGGGAATGGACATCTGCATCACCACAACAGCTAATACTGATAAAGAAGCTCAAAGATTATTGGCTCTTATGGGTATGCCCTTCAGAGAGGGAAGTGGTCCTGTGGCGGACGCCGGACGGAAAAAGAAGCTTAAGTCTCATCATTTTGATTCAAAAAGGGGAGGAAGAGGAAGGAAGTGA 810 0.4728 MATAPSLLHSSGSSFFAQFRAFPHSSSSSVFPHVKRHGNVVVPVRASDSGVVLVEKSDAEKTYRLKTAYTEKIVPLLIEEFSYTNKHQVPKIEKIVVNCGIGDAAQNSKGLDAAISDLAMITGQRPVKTRARASLATFKIREGQPLGIAVTLRGNIMYSFLDRVINLGLPRTRDFQGVNSNSFDGHGNYSIGVKDQGVFPEIRADVVGKPRGMDICITTTANTDKEAQRLLALMGMPFREGSGPVADAGRKKKLKSHHFDSKRGGRGRK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00843 269 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 66 240 IPR002132 GO:0003735|GO:0005840|GO:0006412
Viun5g00843 269 FunFam 50S ribosomal protein L5 60 240 - -
Viun5g00843 269 Pfam Ribosomal protein L5 85 141 IPR031310 -
Viun5g00843 269 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Viun5g00843 269 Gene3D - 56 240 IPR022803 -
Viun5g00843 269 MobiDBLite consensus disorder prediction 241 269 - -
Viun5g00843 269 SUPERFAMILY RL5-like 64 239 IPR022803 -
Viun5g00843 269 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Viun5g00843 269 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Viun5g00843 269 MobiDBLite consensus disorder prediction 255 269 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00843 91 195 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 26.667 7.95e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00843 K02931 - gmx:100818896 448.743