Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00831 ATGACAGCATGTGAAGCCGGGTTCACACCAGATTTCCATAGCGCCAACTACTGTTTTCCAAGTGTGAACTTCACAGCCAATAGCACCTTCGACACCAACCTGCGCACCCTCTTATCCACTCTCACTTCCAACACAGAAATCAACTACGGTTTCTACAATTTCTTACAAGGCCAGGGCACAGACAAAGTAAACGCCATAGGGTTATGCAGAGGAGATGTTAAGCCAGACGAGTGTCGCAGCTGCCTCAACTCCTCTCAAACCAATCTCACACAGCTTTGTCCAAACCAGAAAGAGGCAATTAAGTGGGAAGAGAAATGCATGGTGCGCTATTCCAACATCTCAATATTTCACACCATGGAGTATTCTCCTTCCTATCAAATGCACAACGTCAATAATGCAACAGATGTGGATGAGTTCAATAAAGTGTTAGGTGGGTTACTAAGAAATCTAAGAGACAAAGCTGCAGGAGGTGACTCTCGTCGTAAGTATGCCACGGACACTGCAATTGTTGCAAGTTTTCAAACCATTTACGGTCTTATGCAGTGTACACCTGACCTCTCAACCCAAGATTGCGGTGACTGCTTGGATTGGAGTATCTCAAGTATCCGAAAGCTTTCTAAAGACAGGGTTGGTGCCGTAGTTCTTCGACCCAGTTGCAATGTTAGATTTGAAATTTACCCCTTCTACGACTCCACTACCATATTAGACCCTGCACTACCACCTGCATCACCTTCACTCCACCCACACCAAGAAGATCACAGCAACTATTTGCGAACTGCAACCATCATAGTTCTGCCAACTGTTCTCGTTGTTCTTGTTCTGCTCATTGTTATTAGCAGATACATCAGAAGGAAAGCAAGGAAAAATCTTCCATCTGAAGAAGATGGAGACGGTGATGAAATTGAAGTGGTTGAATCATTGCAATTCAACTTGGACACAATACTAGTCGCGACAAATAACTTCTCTGATTCTAATAAATTAGGAGAAGGTGGGTTTGGTGCTGTTTACCAGGGAAAGCTCTCTAATGGACAAGAGATTGCTGTCAAAAGGTTGTCAAGGAATTCTGGTCAAGGAGACTTGGAATTTAAGAATGAAGTCATTTTGTTGGCTAAGCTTCAGCACAGAAATTTAGTCAGGCTTCTTGGTTTTAGTTTGCGAGGGAGAGAAAAGCTACTTGTTTATGAATTTGTTCCTAATAAAAGTCTTGATTTCTTCATATTTGGTATTATTAACCTTTTCTTGTTTTTCTCTATTGCTTTAGTTCTGTTCATGAAAAAGACCACCAACTATACTAACTCTTCTGAAACTCATTGCTTGACACAAATAGATCCAACAAAGAAAGCACAATTGGATTGGGATACACTTTACAAAATCATTAAAGGCATTGCTCGAGGTCTTCTTTATCTTCACCAAGACTCACGATTACGCATTATACATCGTGATCTCAAAGCAAGTAATATTCTCTTAGATGAAGAAATGACTCCTAAAATATCAGATTTTGGTACGGCAAGATTAATTGTTGCAGATCACACACAAGAAAATACAAGCAGAGTTGTTGGAACCTATGGATACATGGCACCAGAATACATAATGCATGGACAGTTTTCAGTGAAATCAGATGTTTTTAGTTTTGGTGTGCTGGTTCTTGAGATTGTAAGTGGCCAAAAGAACCATGGTGTTCGTCATGAGAAGAATGGGGAAGATCTATTGAGCTTTGCATGGAGAAACTGGAGAGAGGGGACAGTTACAAGTATTATAGATCAAGCATTGAAGAACAGTTCACAAAATGAAATGATAAGATGCATCCACATTGGTTTACTGTGTGTTGAAGAAGATTTAAACAATAGACCAACCATGGCTAACGTTGCACTCATGCTCAACAGTTGTTCTATCAGTCTCCCTGTGCCTAAAAAACCTGCATTTTTGATAGATAGTGCAACTGAAAGCCTCCCAAACATGTCATGGGATGATAATTCATGGGCAACAAAATCAACTCAATCCACTGCAAGATCAGCTCAGGAATCAGTGAATGAAGCTTCAATTACTGAATTATACCCTCGTTAG 2064 0.4055 MTACEAGFTPDFHSANYCFPSVNFTANSTFDTNLRTLLSTLTSNTEINYGFYNFLQGQGTDKVNAIGLCRGDVKPDECRSCLNSSQTNLTQLCPNQKEAIKWEEKCMVRYSNISIFHTMEYSPSYQMHNVNNATDVDEFNKVLGGLLRNLRDKAAGGDSRRKYATDTAIVASFQTIYGLMQCTPDLSTQDCGDCLDWSISSIRKLSKDRVGAVVLRPSCNVRFEIYPFYDSTTILDPALPPASPSLHPHQEDHSNYLRTATIIVLPTVLVVLVLLIVISRYIRRKARKNLPSEEDGDGDEIEVVESLQFNLDTILVATNNFSDSNKLGEGGFGAVYQGKLSNGQEIAVKRLSRNSGQGDLEFKNEVILLAKLQHRNLVRLLGFSLRGREKLLVYEFVPNKSLDFFIFGIINLFLFFSIALVLFMKKTTNYTNSSETHCLTQIDPTKKAQLDWDTLYKIIKGIARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKISDFGTARLIVADHTQENTSRVVGTYGYMAPEYIMHGQFSVKSDVFSFGVLVLEIVSGQKNHGVRHEKNGEDLLSFAWRNWREGTVTSIIDQALKNSSQNEMIRCIHIGLLCVEEDLNNRPTMANVALMLNSCSISLPVPKKPAFLIDSATESLPNMSWDDNSWATKSTQSTARSAQESVNEASITELYPR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00831 687 ProSiteProfiles Gnk2-homologous domain profile. 121 228 IPR002902 -
Viun5g00831 687 CDD STKc_IRAK 327 627 - -
Viun5g00831 687 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 11 115 - -
Viun5g00831 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Viun5g00831 687 ProSiteProfiles Gnk2-homologous domain profile. 12 115 IPR002902 -
Viun5g00831 687 SMART serkin_6 321 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00831 687 Pfam Protein tyrosine and serine/threonine kinase 324 623 IPR001245 GO:0004672|GO:0006468
Viun5g00831 687 SUPERFAMILY Protein kinase-like (PK-like) 307 655 IPR011009 -
Viun5g00831 687 FunFam Cysteine-rich receptor-like protein kinase 10 123 228 - -
Viun5g00831 687 Gene3D Transferase(Phosphotransferase) domain 1 436 634 - -
Viun5g00831 687 MobiDBLite consensus disorder prediction 654 687 - -
Viun5g00831 687 ProSiteProfiles Protein kinase domain profile. 321 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00831 687 FunFam Cysteine-rich receptor-like protein kinase 28 431 634 - -
Viun5g00831 687 Pfam Salt stress response/antifungal 22 112 IPR002902 -
Viun5g00831 687 Pfam Salt stress response/antifungal 131 225 IPR002902 -
Viun5g00831 687 Gene3D Phosphorylase Kinase; domain 1 286 396 - -
Viun5g00831 687 Gene3D - 13 114 IPR038408 -
Viun5g00831 687 Gene3D - 122 228 IPR038408 -
Viun5g00831 687 FunFam Cysteine-rich receptor-like protein kinase 17 290 396 - -
Viun5g00831 687 MobiDBLite consensus disorder prediction 654 680 - -
Viun5g00831 687 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 17 686 - -
Viun5g00831 687 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00831 Viun-Chr5 5244619 5247466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00831 8 687 Receptor kinase-like Gene Family AT4G21410 45.597 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g00831 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00831 - - pvu:PHAVU_008G058700g 933.71