Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00761 ATGGAAGAAAATGATCTAAATAATCATCACAACAACAATGGTAATGAAGAAACAGAATCAAAAGGTGCAAAGAGAAGCCTGGCTGAGAGAAGAGGTTTCAATTCAAATGCTGCAAAAATCAACACAACACTCTTTTGCAGTGAGACTTCAACCAACCCTTCTCCTTCTCCTGCTACTCATCTCACAATTCCTCCTGGCATCAGTCCCACTGCATTGTTGGACTCTCCAATCATGCTTCCAAATTCTCAGGCAACGCCATCATCACCCACCACGGGGAGTTTCTTCGTGATGCCAACTCTTCCTCCCTATTCTGCTCCTCTGAATCAGGTTTGTAGTAATTTCCACTCGGTAAAAGGAGGGAATAGAGAAAGCCAACTACTTGCTCAAGTTCAGAAACCATTAGATTTTTCATTCCCAGCAGATTTTTCAAAAGGCCATTCTGTGAAAAATAGTGAAGTGAATTCATACAATGACATGAAAATGGTAAATGATAAGATTGTTAATGCCAATAATGTTGAGAGGCCAATCTCTGGGTCTGAAGAAGTAAGCGATGAAAGTGGTGTGCCGAAAAACGGTATGAATTGTGAGGATATTGGAGGGCAACCTGGTTCAGAAGGAGAACTGAAAGAAGTATCTCATGCAACAGGAAGTGTAAGAACCTCAGAGGATGGTTATAATTGGAGAAAATATGGACAAAAGCAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGTACACAACCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGATGGCCAAATTACAGAAATCATCTACAAGGGTAATCATAACCATGTAAAACCACACTCTAGCCATAGGGGATCTGCACTTTCTACAGATGAGGTTTCAGACATGGCTGAAGAAGGTGGTGCATTGGCTAAAGCTGATGGTGGGTTCATGTGGAGAAATATTCAGTCAGGAGTAAAAGATTCAAAAAACAGCTTAGATTGGAAGGCTGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACTGAGATTTCAGATCCTTTATCAACCAACAAAGCTAAATCTCTATCTATGTTTGAATCGGAAGAGACTCCAGAGCTTTCTTCTACACTTGCTAGTCATGATATGGAAGAAGATGGAGCCACTCAAGGAATTCCGATGGTTGAAGATGAAGTTGAGAATGATGAATCGGAACCTAAAAGAAGGAAGAAAGAGAGTTATCCAGCTGAATCAAATTTGCCTCCTAGGTCTGTTCGTGAGCCAAGAGTGGTAGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGACAGAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACGAGTGCTGGATGTATGGTAAGGAAACATGTGGAAAGGGCCTCACACAATCTAAAATTTGTCCTTACAACTTATGAGGGAAAGCACAATCATGAAGTGCCCACTGCAAGAACCAGCAATCAGATAAACTCAAGTGATGGTGGTTTACACCCCAATGGTGTGAATGGGCAAGTGGGTCTTGCTTTACCAGGGAGTGGAGGCATTAAGCCTGATACTCATCAAACTCTTGCACATCATTTTGACAGAAAACCTGAATTCAGCAGTGAGTTTCTGAGGCCTAGTTTGATTGGAGGTTTCAGCAGTGACATGAAGTTTCCTCCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAATAACACCATGCCTTATAGCTCCTATGGACTCAACCCTGATCGTTGTGCTGCTGCACCTCAATCTGGATCCATTGCTTCAATGTTCCCTGATTTTCCAATGCCACTACCATTGAATCTTCCCTCATCTGGAAAATTTTCAATTGCTGGACTTAACTTCAACTGTGCCAAACCAATAAATCCTATCCAATCTTTCCTTTCTGGGCAGCAAGTGAAGGACATTGATACAGTGTTTCTGAGGCCTAAGCAGGAACAGAAGGATGATACTATATATGGCTCCTGCATTCCCTCACTAGATGCAAATGCTTCACTCTCTTCTTCTTCAGCACCACCATCCATTTATCAACGAGTCATGCAAAATTTCCCTTCATAA 2112 0.4176 MEENDLNNHHNNNGNEETESKGAKRSLAERRGFNSNAAKINTTLFCSETSTNPSPSPATHLTIPPGISPTALLDSPIMLPNSQATPSSPTTGSFFVMPTLPPYSAPLNQVCSNFHSVKGGNRESQLLAQVQKPLDFSFPADFSKGHSVKNSEVNSYNDMKMVNDKIVNANNVERPISGSEEVSDESGVPKNGMNCEDIGGQPGSEGELKEVSHATGSVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSHDGQITEIIYKGNHNHVKPHSSHRGSALSTDEVSDMAEEGGALAKADGGFMWRNIQSGVKDSKNSLDWKADGQERTSSTSVVTEISDPLSTNKAKSLSMFESEETPELSSTLASHDMEEDGATQGIPMVEDEVENDESEPKRRKKESYPAESNLPPRSVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKFVLTTYEGKHNHEVPTARTSNQINSSDGGLHPNGVNGQVGLALPGSGGIKPDTHQTLAHHFDRKPEFSSEFLRPSLIGGFSSDMKFPPSSLCQMKYPSLNNTMPYSSYGLNPDRCAAAPQSGSIASMFPDFPMPLPLNLPSSGKFSIAGLNFNCAKPINPIQSFLSGQQVKDIDTVFLRPKQEQKDDTIYGSCIPSLDANASLSSSSAPPSIYQRVMQNFPS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00761 703 Gene3D WRKY domain 208 281 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 ProSiteProfiles WRKY domain profile. 216 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 MobiDBLite consensus disorder prediction 332 373 - -
Viun5g00761 703 Gene3D WRKY domain 423 489 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 SMART WRKY_cls 436 495 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 SMART WRKY_cls 221 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 Pfam WRKY DNA -binding domain 222 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 Pfam WRKY DNA -binding domain 437 494 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 ProSiteProfiles WRKY domain profile. 431 496 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 MobiDBLite consensus disorder prediction 323 419 - -
Viun5g00761 703 MobiDBLite consensus disorder prediction 396 411 - -
Viun5g00761 703 SUPERFAMILY WRKY DNA-binding domain 429 496 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 FunFam WRKY transcription factor 57 422 496 - -
Viun5g00761 703 SUPERFAMILY WRKY DNA-binding domain 218 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g00761 703 MobiDBLite consensus disorder prediction 1 28 - -
Viun5g00761 703 FunFam WRKY transcription factor 209 281 - -
Viun5g00761 703 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 507 IPR044810 GO:0003700
Viun5g00761 703 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00761 Viun-Chr5 4779972 4783973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00761 1 499 WRKY Transcription Factor Family AT5G56270 39.544 2.92e-94 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun5g00761 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00761 K18835 - gmx:100800211 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00761 5 4779972 4783973 Viun5g00761 5 4779972 4783973 ECH