Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00755 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCACTTCACCCTCTTCATCTTTCAGAAAGCGCAAGAGCAACGCCAAGAAGAGGCTTGGATCAAGAGCTTCTTCCTTTGAGTATTGGAGGAATGAGCCTCTCCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCATCCTTGTTCACTCAGCAAGGCAAGAAGGGCACCAACCAGGATGCCATGGTGGTTTGGGAGAACTTTTGTTCTAGACAAGATACTGTTTTCTGTGGAGTTTTTGATGGCCATGGTCCATATGGTCACATGGTTGCAAAAAGAGTGAGAGATTCTCTTCCTCTAAAACTGAATGCCCATTGGGAAGTTAATGTTCCTGGTGAGGAAGTCCTCAAGGAGATTAGCGTTAATCCTGCAGGAAGCATGAACATAGAAGAGGCTGCTTCTGCATCTGCTGATGAGGATCCTCGGGTATCTGTTGATGCTGAAGAAACAGAAAAACACCCTGAAATCTTTCAGACACTTAAGGAATCCTTTTTGACGGCGTTCAAAGTTATGGATAGGGAACTGAAGACCCACCAAAGTATTGATTGTTTTTGTAGCGGAACAACAGCAGTAACTCTGATTAAGCAGGGCCATGATCTTATCGTTGGGAATGTTGGTGACTCTAGAGCTGTGTTGGGTACAAGAGCGAATGATGATTCTCTTGTCGCTGTCCAGTTAACTGTGGATCTGAAACCCAATCTTCCAGCTGAAGAAGAGAGAATTCGCAAATGTAAAGGCCGTGTTTTTGCTCTTCAGGATGAACCCGAAGTTGCTCGTGTCTGGTTGCCGAACAACGACTCACCAGGCCTTGCCATGGCCAGGGCATTCGGTGATTTTTGTCTCAAAGATTTTGGCCTGATATCTGTTCCAGAGATGTCATACAGAAGACTCACCGAAAAAGACGAGTTCATTGTCTTAGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATAGTGGCAGCCACATCAAGGCGTGCCTCGGCCGCTCGAGCGCTGGTCGAGTCAGCCGTTCGCGCATGGCGGTACAAGTATCCGACCTCCAAAGTGGATGACTGTGCTGTGGTTTGTCTCTTTCTGGACACTGCCTCACACAAATTATGCAGTGCTTCCATTGCCAAGTCCAAGGAACAACCTAGTTCGGCCGTCCAAGTCCACAATGGCGACCGGGGAGACGTTTCGGCCCCGACCGGTCTGGCTAGGTCAGGAACATGCAGGGAGAACGATGAAGGTGAAGGCGAATGTGAAGGTGATGACACCAACAAGAATGAGGAGGAGAAAGAGTCTAAGGAAGATGAAATAGATCCTGAATCAGAAATAGAATGGTCTGCACTTGAAGGAGTGTCTCGTGTGAACACATTGCTAAACCTCCCAAGGTTTGAACCTGACAAAGAAGACATGATGAGAAAACAAAATTGA 1482 0.4777 MGSCFSAESRSPHPTSPSSSFRKRKSNAKKRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTVFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEVNVPGEEVLKEISVNPAGSMNIEEAASASADEDPRVSVDAEETEKHPEIFQTLKESFLTAFKVMDRELKTHQSIDCFCSGTTAVTLIKQGHDLIVGNVGDSRAVLGTRANDDSLVAVQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEMSYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVAATSRRASAARALVESAVRAWRYKYPTSKVDDCAVVCLFLDTASHKLCSASIAKSKEQPSSAVQVHNGDRGDVSAPTGLARSGTCRENDEGEGECEGDDTNKNEEEKESKEDEIDPESEIEWSALEGVSRVNTLLNLPRFEPDKEDMMRKQN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00755 493 CDD PP2Cc 61 381 IPR001932 -
Viun5g00755 493 MobiDBLite consensus disorder prediction 399 466 - -
Viun5g00755 493 MobiDBLite consensus disorder prediction 1 22 - -
Viun5g00755 493 MobiDBLite consensus disorder prediction 1 32 - -
Viun5g00755 493 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Viun5g00755 493 SUPERFAMILY PP2C-like 55 382 IPR036457 -
Viun5g00755 493 Gene3D - 57 384 IPR036457 -
Viun5g00755 493 PANTHER PROTEIN PHOSPHATASE 31 379 IPR015655 GO:0004722|GO:0006470
Viun5g00755 493 FunFam probable protein phosphatase 2C 33 57 384 - -
Viun5g00755 493 SMART PP2C_4 53 379 IPR001932 -
Viun5g00755 493 Pfam Protein phosphatase 2C 167 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00755 Viun-Chr5 4723636 4727798 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00755 1 485 PP2C-type Phosphatase Gene Family AT3G02750 62.500 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00755 - - gmx:100790373 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00755 5 4723636 4727798 Viun5g00755 5 4723636 4727798 ECH