Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00714 ATGCAAAACCTTCAAGTAGTGAAACAGAAGAAGCAGCAAGAGAATCTTAGCTGTATGCAACAACACTCTTTTCATCTCTTCTTCATAAATTCAACCTTTTCACACACACACACACTCTTCTTTTCTTCTCTGCACCAAAAGTCCCCACTGCCATTACTACATATCTCACTCTCTCTCTCATTCGCCCATTCACTTCACACAACAACCACAACACAGAAAATGCAAGCCTCTTCCTCCTCCTCCTCCTTCTTCTTCTTCTTGTCGTTGTTGTTTTTGTCATGTGCATTGTCTTCTTCACAACTCTTGTTCTTCAACAGAAGGGTCCTCCATGAACCCTTTATTCCTTTGACCTCTCTTCCTCCTTCTGAACCACCAAAACCACCACCTCCTCATCCTTCTCCTTCAACCTCAAAACAAAATCCCAAATACCCTTCATCATCCACCATCCCCACCACCACCATTTCCTCCACACCAGTACCAACAACCGCTACAACAACCCCAACAACAACAACAACACAATCACCATTTTTTCCGTTATACCCCTCTTCCCCTCCTCCTCCTTCTCCGATCACATTTGCCTCCTTTCCTGCCAACATCTCCTCCCTCATTCTCCCTCACTCCCCAAAACCCAATTCCTCCTCCAACAAACTTCTTCCCGTTGCTCTCGCCGCTGTTGTCGCTGCCGCACTCGCCGTCTCCATCTCTGCATTTGTCTGTTACCGCCGCCGCCGGAACCCTCCCCCCTCCCCAGCAGGCAAAGTTCTCCGTTCCGACACTGCCCTCCTCCCGCTCCGCCGCAATGCCGAAACTTCCGTCGAAACACGCAAGCTCCGGCACACGTCCTCCACCAGCTCCGAGTTTCTCTACCTCGGCACTGTCGCGAACTCTCATATGATAGAGGACTCCGATGTTGGTGACGGAGACCGGAAAATGGAATCCCCGGAGCTCCGGCCTCTTCCGCCGCTCGCGCGACAAGCTTCAGTTCCGCCTCCGCTTCCACCCCGCGACGAGGCGGGTTTCACGACAGCGGAGGAGGACGAAGACGAGTTTTACTCGCCGAGAGGTTCGTCGCTGGGAGGCTCCGGCGGAACCGGATCAGTTTCCCGGCGAGTGTTCGCCGTCGATCGAAGCGTAACCTCTAGCTCGTGTTCTTCCTCTTCTTCCGGATCGCCGGAAAGGTCTATCCCGAACATGCCGCCGCCAGCGGGTTCGAGTTATCGGAAAGCACTGCCGAAATCACCGGAAAATTACAACCACCCGCACGTGCATTCTTCTTCTTCGATGTGCTCAACACCAGATAGGGTTTTTGCTGAACGTGATAACGATGTGTTAAGTGCATGTGTACATGCACATGCAGCACCATCGTCATCACATGAGGGAACATTGGAGAAAAATGAAAATGCATTACCTTCATCGCCACCGCCGAGATTATCTGATGCTTCTTCGTCCTCCGCCTTTTCTCTTCCCTCTTCGCCGGAGAAGGTGACACGTCACCATACTTTCGACCAGTCTCCGAGAATGTCGAGTGTCTCCGACGGACTAATGTTACCTGGCTTGTCATCGGTGCCTTTATCACCCGCCCTACTTTCATCGCCGGAAACGGAAAGAGGAATTTTCAGTGAATTGGGAACCGGTTCTTTCGGTTCGCAGAGAAAACACTGGAGCATTCCAGCACTGTCAATGCCAATAACAACACCGTTTGATGAAATTGGAACCGTTCCAGCTCCTCCACCTTTGCCCCAGAGGAAGCACTGGGAGATTCCAGGCCCTGCTCCGCCACCACCACCACCGTTGCCACGGCAGAGGAAGCAATGGGGAGTTCCAGCGCCGGGGCCGTCAACACCGGTTGGTCAACCCGTGTCAAGGCCACCGGAATTGGTGCCTCCTTCGAGGCCTTTTGTGTTGCAAAACCAAGCAACCAACGTTGAGTTGCCGGCGAGCTTGAGGGAAATTGAAGAGACTGGTAAACCAAAATTGAAGCCCCTGCATTGGGACAAAGTGAGAACAAGCTCTGAACGTGAAATGGTGTGGGATCAGATGAAGTCCAGTTCGTTTAAATTGAATGAGAAAATGATTGAAACGTTGTTTGTAGTGAACACACCAAACCCCAAGGCCAAGGATGCAACTACAAACTCTATTTCTCACCCGCCAAATCAGGAGGAAAGAGTACTCGATCCTAAAAAGTCTCAAAATATTTGTATCTTGCTGAAAGCGCTTAACGTCACTGTAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTACCACTGATACACTTGGAACAGAATTACTGGAAAGCTTATTAAGAATGGCACCAAGCAAGGAAGAAGAACGCAAGTTGAGAGAACATAAAGATGACTCACCAACCAAGCTTGGTCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGATTGAAGCAATGCTTTTCATAGCTAGTTTTGAGTCTGAAGTGGAGTATCTTAGGACATCCTTTCAAACACTAGAGGCTGCCTGTGAAGAGCTGCGACATTCCAGAATGTTCTTGAAGCTGTTGGAGGCTGTACTTAAAACCGGGAACCGCATGAACGTGGGGACCAACCGTGGGGATGCAGAGGCATTCAAACTTGACACTCTCCTCAAGCTGGCTGATGTCAAAGCCGCAGATGGCAAAACCACTCTACTGCATTTCGTTGTACAAGAAATTATTCGAACAGAAGGTGCACGTCTCTTTGACACTAATCAAACTCCAAGCTCTAATACATTGAACGAAGATGCCAAGTGTAGGAGGCTTGGTCTACAAGTAGTATCAAGCCTGAGTTCAGAGCTATCAAATGTGAAGAAGGCTGCTACTATGGATTCCGAAGTTCTCAGCAGTGATGTGTTAAAACTTTCCAGAGGAATTGCAAACATAGCAGAGGTTGTGCAGTTAAACCAAACCATGGGATCAGATGAAAGCAGTCAGAATTTTACAGAATCAGTGAACAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGTCCAAGAAAACGTTGCTTCCTCCCTTGTGAAGGAGATTACAGAGTATTTTCATGGGAACTTGTCAAAAGAAGAAGCTCATCCATTCAGGCTCTTCATGGTTGTAAGAGACTTTCTAGCAGTTCTTGACCGTGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACCATGGTTAGTTCAGCTCATAAATTCCCTGTGCCAGTTAATCCAATGCTTCCACAACCTCTTCCTGGATTACATGAGAAGCATCAATATAATAATAATACCTCTTCAGATGATGATGAGACTCCATCACCTTAG 3321 0.4821 MQNLQVVKQKKQQENLSCMQQHSFHLFFINSTFSHTHTLFFSSLHQKSPLPLLHISLSLSFAHSLHTTTTTQKMQASSSSSSFFFFLSLLFLSCALSSSQLLFFNRRVLHEPFIPLTSLPPSEPPKPPPPHPSPSTSKQNPKYPSSSTIPTTTISSTPVPTTATTTPTTTTTQSPFFPLYPSSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPVALAAVVAAALAVSISAFVCYRRRRNPPPSPAGKVLRSDTALLPLRRNAETSVETRKLRHTSSTSSEFLYLGTVANSHMIEDSDVGDGDRKMESPELRPLPPLARQASVPPPLPPRDEAGFTTAEEDEDEFYSPRGSSLGGSGGTGSVSRRVFAVDRSVTSSSCSSSSSGSPERSIPNMPPPAGSSYRKALPKSPENYNHPHVHSSSSMCSTPDRVFAERDNDVLSACVHAHAAPSSSHEGTLEKNENALPSSPPPRLSDASSSSAFSLPSSPEKVTRHHTFDQSPRMSSVSDGLMLPGLSSVPLSPALLSSPETERGIFSELGTGSFGSQRKHWSIPALSMPITTPFDEIGTVPAPPPLPQRKHWEIPGPAPPPPPPLPRQRKQWGVPAPGPSTPVGQPVSRPPELVPPSRPFVLQNQATNVELPASLREIEETGKPKLKPLHWDKVRTSSEREMVWDQMKSSSFKLNEKMIETLFVVNTPNPKAKDATTNSISHPPNQEERVLDPKKSQNICILLKALNVTVEEVCEALLEGTTDTLGTELLESLLRMAPSKEEERKLREHKDDSPTKLGLAEKFLKAVLDVPFAFKRIEAMLFIASFESEVEYLRTSFQTLEAACEELRHSRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKAADGKTTLLHFVVQEIIRTEGARLFDTNQTPSSNTLNEDAKCRRLGLQVVSSLSSELSNVKKAATMDSEVLSSDVLKLSRGIANIAEVVQLNQTMGSDESSQNFTESVNKFIRMAEEEIPKIQVQENVASSLVKEITEYFHGNLSKEEAHPFRLFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHEKHQYNNNTSSDDDETPSP 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00714 1106 MobiDBLite consensus disorder prediction 373 393 - -
Viun5g00714 1106 SMART it6_source 649 1064 IPR015425 -
Viun5g00714 1106 Gene3D Formin, FH2 domain 649 1058 IPR042201 -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 119 180 - -
Viun5g00714 1106 ProSiteProfiles Formin homology-2 (FH2) domain profile. 649 1075 IPR015425 -
Viun5g00714 1106 SUPERFAMILY Formin homology 2 domain (FH2 domain) 662 1061 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 1077 1106 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 138 177 - -
Viun5g00714 1106 Pfam Formin Homology 2 Domain 653 1049 IPR015425 -
Viun5g00714 1106 PANTHER FORMIN-RELATED 84 1098 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun5g00714 1106 MobiDBLite consensus disorder prediction 301 315 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 119 137 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 452 512 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 1088 1106 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 569 624 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 458 494 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 571 603 - -
Viun5g00714 1106 MobiDBLite consensus disorder prediction 299 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00714 Viun-Chr5 4420795 4425091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00714 174 359 FH2 protein (formin) Gene Family AT3G25500 45.894 5.19e-19 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00714 - - vun:114185313 1781.15