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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Viun5g00710
ATGGCCGGCATAGACTTGGGTTCAGCATCGCATTTTGTTCATCATCGCCTTCAACGCCCGGACCTTGAAGACGATGACAACCAACACGACCAAGACGACACCAACAACAACGTTAACGATCACGAAGGGCTTGACCTAGTTGCCACAAATCAAGGTCATCCCGGTGATATTGTCGCTCGCAGGCCAAGAGGAAGACCTCCCGGTTCAAAGAACAAGCCCAAGCCACCTGTTATCATCACCAGAGAGAGTGCAAACACGCTTAGGGCTCACATCCTTGAAGTCACCACTGGCTGTGATGTCTTTGACTCCGTCGCTACCTACGCAAGGAAGCGCCAAAGAGGGATCTGTGTCCTCAGTGGGAGTGGCACCGTCACCAATGTCACGCTCCGCCAGCCCGCCGCAGCCGGCGCCGTTGTCACGCTTCACGGAAGGTTCGAGATCCTCTCTTTGTCGGGATCATTCCTCCCACCTCCTGCTCCGCCGGGTGCCACCAGTTTGACCGTCTTTCTCGGCGGAGGACAGGGCCAGGTTGTGGGTGGAAACGTTGTTGGCCCCTTGGTGGCTTCTGGGCCTGTTATTGTCATTGCTTCATCTTTTACTAATGTAGCATACGAGAGGTTGCCTTTGGATGAAGAAGAATCTATGCAGATGCAACAGGGACAGTCATCCGGCGGTGGTGGTGGCGGTGGCGGTGGTAGCGGTGGTGGTGGTGGTGGAGTGAGTAATAACTCTTTTCCTGACCCTTCTTCAGGGCTTCCATTCTTCAATTTGCCCTTAAACATGCCTCAGTTACCTGTTGATGGTTGGGCTGGGAACTCCGGTGGAAGACAATCTTACTGA
840
0.5417
MAGIDLGSASHFVHHRLQRPDLEDDDNQHDQDDTNNNVNDHEGLDLVATNQGHPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTTGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEEESMQMQQGQSSGGGGGGGGGSGGGGGGVSNNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGRQSY
279
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Viun5g00710
279
MobiDBLite
consensus disorder prediction
19
39
-
-
Viun5g00710
279
CDD
DUF296
88
163
IPR005175
-
Viun5g00710
279
ProSiteProfiles
PPC domain profile profile.
84
221
IPR005175
-
Viun5g00710
279
MobiDBLite
consensus disorder prediction
19
77
-
-
Viun5g00710
279
Pfam
Plants and Prokaryotes Conserved (PCC) domain
88
201
IPR005175
-
Viun5g00710
279
MobiDBLite
consensus disorder prediction
212
257
-
-
Viun5g00710
279
Gene3D
-
87
221
-
-
Viun5g00710
279
PANTHER
AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15
28
237
IPR014476
GO:0003680
Viun5g00710
279
FunFam
AT-hook motif nuclear-localized protein
87
214
-
-
Viun5g00710
279
SUPERFAMILY
AF0104/ALDC/Ptd012-like
84
217
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Viun5g00710
Viun-Chr5
4399731
4401834
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Viun5g00710
1
276
AT-hook Motif Nuclear Localized (AHL) Family
AT4G17800
64.784
4.08e-101
295
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Viun5g00710
-
-
vra:106758954
445.277
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