Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00681 ATGGAAGGAGAGAGAGGTGGTGCTACCAATTATGACCTTCAAGTTTCCTTCTCCAACACCCCACAACCCATACACGAATTGGGTTTTGTTCACTACCAAGAAAACCAGCTCCTTGGTTTCTTGTCACCTTCTTCACAATCTCAATCCTTAAACACCACCGATGTTGTTGTTACTTCTTCCGCCACAACTGCTGCAACCATCGGATTCATGAATCACACCCAACTTGTCGGAAAAACTTGGAACAACGACCAGGTAGAAACTCTAGATCCAAAGCCTGTCGATGAAGAAAACTGCACTGGAAACGCTAGTGAAGGCAACAACAACGCTTGGTGGAGGAACGCAGGTACAGAGAAGAACAAGGTGAAGATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGCGATGTAGATGTGCTTGACGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCGAGAAGTTATTACCGTTGCACCCACAACAACTGCAGGGTGAAGAAGAGGGTTGAACGACTCTCAGAGGATTGTCGTATGGTGATAACCACGTATGAAGGAAGACACAATCACTCTCCTTGCGAGGACTCAAATTCATCGGAGCATGAATGCTTTACCTCTTTCTAG 654 0.4495 MEGERGGATNYDLQVSFSNTPQPIHELGFVHYQENQLLGFLSPSSQSQSLNTTDVVVTSSATTAATIGFMNHTQLVGKTWNNDQVETLDPKPVDEENCTGNASEGNNNAWWRNAGTEKNKVKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCEDSNSSEHECFTSF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00681 217 FunFam WRKY transcription factor 57 129 203 - -
Viun5g00681 217 Pfam WRKY DNA -binding domain 144 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00681 217 SMART WRKY_cls 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun5g00681 217 Gene3D WRKY domain 129 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g00681 217 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 207 IPR044810 GO:0003700
Viun5g00681 217 SUPERFAMILY WRKY DNA-binding domain 135 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun5g00681 217 ProSiteProfiles WRKY domain profile. 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00681 Viun-Chr5 4267077 4274291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00681 3 217 WRKY Transcription Factor Family AT2G44745 56.889 1.80e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun5g00681 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00681 - - gmx:100170677 381.333