Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00672 ATGGGCACATCCGTTTTTCTCCTTCATCTTATACTTTCCTCATTTCTCCTTTCCACTTTCTTCCTGGAACCTGTTCGTGGCACCAAAAAGTGTTACATTGTATATTTGGGAGCTCATTCTCATGGTGTCAACCCTACTTCCGTTGATCTCCAAATTGCCACCGATTCTCATTACAATCTTTTGGGTTCTATCATGGGAAGTGAAGAGAAAGCGAAAGAAGCGATTATTTACTCATACAACAAACACATAAATGGGTTTGCAGCACTGCTGGAAGAGGAAGAAGCAGCAGACATTGGCAAGAACCCTAACGTGGTGTCTGTGTTCTTGAGCAAAAAACATAAACTGCACACTACCCGCTCTTGGGAGTTTCTTGGACTACACAGAAATGGTAAGAACTCTGCATGGCAAAAGGGAAGCTTTGGTGAAAATACAATAATTGCAAACATCGACACTGGTGTTTGGCCTGAGTCAGATAGCTTCAGTGACAAAGGATATGGTCCCGTTCCCTCCAGATGGCGTGGGGGTAATGTCTGTCAAATTACCAAACTTCCAAGCACTAAGAAAAATCTATGCAACAGAAAGCTGATAGGAGCAAGATTCTTCAACAAAGCTTTTGAGGCTTACAATGGCCAACTTGTTCCCCCGCTGCAAACAGCGCGTGACTTCATGGGACATGGGACTCACACTCTATCAACAGCTGGGGGCAATTTCGTCGGAAGCGCGAGTGTATTTGCGGTGGGTAATGGCACCGCAAAGGGTGGGTCTCCGAGAGCACGAGTTGCAGCATACAAAGTGTGTTGGGCTTTGACGGACGCAGCCGATTGTTACGGCGCGGATATTTTGGATGCTATCGACCATGCCATCGACGACGGTGTCGATCTCATCAATCTTTCAGTCGGTGGATATCACGATGTGAGCCCCGAAGGAATACTCACCGACGAGGTTTCCATTGGAGCCTTCCATGCGATTTCTAGAAACATACTTTTAGTTGCTTCTGCAGGAAACGATGGACCCATACCTGGTTCTGTTGTGAACGTGGCACCTTGGGTCTTTACCATTGCTGCTAGCACCATAGACAGAGACTTCAGCAGTACCTTAACAATCAACAACAATCAACAAATCGAGGGAGCCAGTCTTTTTGTAAATTTGCCACCGAATCAGGCCTTTTCGCTGATCCTCTCCACCGATGCTAAGCTTCCTAATGCCACATTTCGAGACGCTCAACTGTGTAGAGCAGGAACACTGGATCCCAGACAAGTGAATGGGAAAATAGTGTCATGCAGTCGCGAAAACATAAAATCTGTTGCGGAGGGTCAGGAAGCTCTCTCTGCAGGTGCAAAGGGAATGATTGTGAGCAATCAACCGCAACAGGGAACTACAAATGAAGCTGAGCCACATGTTTTCTCCGCTGTGGGCAGACCTAACCGTCATCCCCCTCCTAAAACAGATGCTACTCCTCCTCCCCCTCTTGCTACAGAGTTTCAAATAGTTGACGCGGAGGATCCTTTTAAAACAGGTGCTACCATTAGAATGTCCCCAGCAAGAACATTATTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCAAGGGGACCCAATAAGTTGCAGCCAGCAATTCTCAAGCCTGATGTGACTGCGCCTGGTGTGAACATTCTTGCTGCCTACTCAGAATTCGCAAGTGCATCAACCTTGCTAACAGACAACCGTCGAGGGTTTAAATTCAACGTAATGCAAGGAACTTCTATGTCTTGCCCTCATGTTACAGGCATTGCTGGACTTATCAAAACACTTCACCCTAATTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCACAGCAACCACACGCGACAACACTAATAGACCAATACATGACGGGTTTGTTGAAACAACCGCAACTCCCTTTGCTTATGGTTCAGGACATGTTCAACCTGACCTTGCCATAGACCCCGGCCTCGTTTACGATCTAGGCCTCACTGATTACTTGAACTTCTTGTGCGCTTCTGGATACAACCAGCAACTCATTTCTGCTCTCAATTTCAACAGAACTTTCATTTGTTCAGGCACTCACAGTGTAACAGATTTGAACTACCCCTCAATCACATTGCCAAATCTAAGCTTAAAAGCCGTAACCATTGCTCGCACGGTAACAAATGTTGGGCCACCAGGCACGTACACTGCCACTTTCCAATTGCTTGGATATAACATTACCGTTGTGCCAAGTTCCTTGACTTTCAGCAAAATTGGTGAAAAGAAGACATTCAAGGTTACTGTGCAGGCACGCAGTGAAACAAAGCGGAGAACTTATGAATTTGGGGAATTGCGATGGACTGATGGAAAACATATAGTAAGGAGTCCTATTACAGTAAAGCGGCGCAGATGTAAACCTCTTCAATGGAGTTGGTTGTGTTGGGATTCTTAG 2430 0.4597 MGTSVFLLHLILSSFLLSTFFLEPVRGTKKCYIVYLGAHSHGVNPTSVDLQIATDSHYNLLGSIMGSEEKAKEAIIYSYNKHINGFAALLEEEEAADIGKNPNVVSVFLSKKHKLHTTRSWEFLGLHRNGKNSAWQKGSFGENTIIANIDTGVWPESDSFSDKGYGPVPSRWRGGNVCQITKLPSTKKNLCNRKLIGARFFNKAFEAYNGQLVPPLQTARDFMGHGTHTLSTAGGNFVGSASVFAVGNGTAKGGSPRARVAAYKVCWALTDAADCYGADILDAIDHAIDDGVDLINLSVGGYHDVSPEGILTDEVSIGAFHAISRNILLVASAGNDGPIPGSVVNVAPWVFTIAASTIDRDFSSTLTINNNQQIEGASLFVNLPPNQAFSLILSTDAKLPNATFRDAQLCRAGTLDPRQVNGKIVSCSRENIKSVAEGQEALSAGAKGMIVSNQPQQGTTNEAEPHVFSAVGRPNRHPPPKTDATPPPPLATEFQIVDAEDPFKTGATIRMSPARTLFGRKPAPVMASFSSRGPNKLQPAILKPDVTAPGVNILAAYSEFASASTLLTDNRRGFKFNVMQGTSMSCPHVTGIAGLIKTLHPNWSPAAIKSAIMTTATTRDNTNRPIHDGFVETTATPFAYGSGHVQPDLAIDPGLVYDLGLTDYLNFLCASGYNQQLISALNFNRTFICSGTHSVTDLNYPSITLPNLSLKAVTIARTVTNVGPPGTYTATFQLLGYNITVVPSSLTFSKIGEKKTFKVTVQARSETKRRTYEFGELRWTDGKHIVRSPITVKRRRCKPLQWSWLCWDS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00672 809 FunFam Subtilisin-like protease SBT5.3 22 116 - -
Viun5g00672 809 Pfam Fibronectin type-III domain 697 792 IPR041469 -
Viun5g00672 809 Pfam Peptidase inhibitor I9 32 116 IPR010259 -
Viun5g00672 809 CDD Peptidases_S8_3 113 617 IPR034197 -
Viun5g00672 809 ProSitePatterns Serine proteases, subtilase family, serine active site. 581 591 IPR023828 -
Viun5g00672 809 CDD PA_subtilisin_like 365 471 - -
Viun5g00672 809 SUPERFAMILY Subtilisin-like 115 655 IPR036852 GO:0004252|GO:0006508
Viun5g00672 809 Gene3D - 668 795 - -
Viun5g00672 809 Pfam Subtilase family 141 623 IPR000209 GO:0006508|GO:0008236
Viun5g00672 809 ProSiteProfiles Serine proteases, subtilase domain profile. 120 651 - -
Viun5g00672 809 FunFam Subtilisin-like protease SBT1.5 143 371 - -
Viun5g00672 809 Gene3D - 359 518 - -
Viun5g00672 809 Pfam PA domain 409 468 IPR003137 -
Viun5g00672 809 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Viun5g00672 809 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Viun5g00672 809 PRINTS Subtilisin serine protease family (S8) signature 580 596 IPR015500 -
Viun5g00672 809 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Viun5g00672 809 Gene3D Peptidase S8/S53 domain 144 664 IPR036852 GO:0004252|GO:0006508
Viun5g00672 809 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 792 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00672 Viun-Chr5 4188495 4193787 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00672 32 793 Subtilisin-like Serine Gene Family AT2G04160 50.391 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00672 - - gmx:100813564 1205.28