Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00664 ATGGAGAGGGTTGCAGAGCCAAAGCTACTTCCTCGGTCCTTGCCTGTTCTGGTTGAGGTATCTAATGCGCACACTGCTTCAATAAGAGAAGCTGGTCAAAGATTACATTCGCAGGATGTTTCGGGTGTACGAGGAATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGTCCCCATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGGTTCGATACACGGTCCTGTCAAGAGCCTCCCTCCCCTGTTACTACAAGAACGTGGAAAGGAAAGAGCTCTTCACCTGAAGCCGTAGAGCTTGTGCCTGATGTTCAGACATTGAACGGTAGCAATGATTCTTTTGGGGAAACTGGTCCAAGTTCATTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTCATGAGAACGGTTTATGTACCAATAGGTCAAACCAAATCTGAGGCAACATGCTTGATGAAGAGTGTGTCCTTGAAGGGTCCTGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAACCATGGCTACTGTTTCTCCTGCAGACAGCCTGGTTGATGAGTCAAATGAGACGAGTAACATACCCATACCCTCGCCGCCTTTAGGTGCTCGTGCTTCTCGGAATACTGAGAATTCCCCTCCTGCTCCAGACTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTGAGTCCTCTTAGTAGTGTTGATAGTACTAGTGTTGTGAGAACAATGAGCATAGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTGACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACAAAAGGAAGTGTAAGAGGGGATTCACTGGAGAGTGCAAAAACCAGTGCTAGTAGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATAACTGGTAGTGCCAATAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCGATCCTTGCCATCCGAGCACGCGACGGAATTCTCGGCATGAGTCACTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAACTGAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAACGAGAGATATTGCAGTTGCTGGACCATCCATTTCTTCCTACTTTGTATACACATTTTGAGACAGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTCGGAGTATGCTGCACGGTTTTATGCAGCAGAGGTTCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTGGTGTACAGAGACCTTAAACCTGAAAATGTGCTGGTCCGAGATGATGGCCACATAATGCTCTCAGACTTCGACCTTTCTCTCAGATGTGCTGTTTCGCCTACCCTTATCAGAAATATTGACGGCGATCCCTCCAAACGAGCCGGCGGTGCGTTCTGCGTGCAGCCGGCTTGTATCGAGCCTTCCTCGGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTTTTCGCTCAGAAAAATAAGAAGTCACGGAGACCTAAAGCCGATCCTGGCCCGCCATCAAGCACACTTCCTGAGCTTGTTGCAGAACCAACAACTGCTAGGTCCATGTCTTTTGTGGGCACTCACGAATACCTTGCTCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGGATTTTCTTGCATGAACTATTATATGGTAAGACTCCTTTCAAAGGTTCCGGAAATCGCGCGACTCTCTTCAACGTAGTTGGACAGCAGCTCAGATTTCCGGAATCACCGGCCACCAGTTATGCGAGCCGTGATCTCATCCGCGGCCTGCTGGTGAAGGAGCCGCAGCACCGGCTCGGGGTGAAGAGGGGTGCGACTGAGATCAAACAGCACCCGTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACGCCACCAGAAGTTCCAAGAGCAATTGAATGTGATGTTGTAGCAGCAAAGTTAGAAGCAGTTGATAGTGTTGGTGTTGGTGTTGGCATGAACAATAGTAGTAAGAGGATGGGAGGTAATAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2307 0.472 MERVAEPKLLPRSLPVLVEVSNAHTASIREAGQRLHSQDVSGVRGIPAREGNQFSKSRDVPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVTTRTWKGKSSSPEAVELVPDVQTLNGSNDSFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEATCLMKSVSLKGPGPFLEDLSICVPAKKQTMATVSPADSLVDESNETSNIPIPSPPLGARASRNTENSPPAPDSEEKECVWDASLPPSGNVSPLSSVDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRRPKADPGPPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAIECDVVAAKLEAVDSVGVGVGMNNSSKRMGGNNEMKSGGKYLDFEFF 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00664 768 MobiDBLite consensus disorder prediction 294 347 - -
Viun5g00664 768 CDD STKc_phototropin_like 368 720 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 202 219 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 571 590 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 202 267 - -
Viun5g00664 768 FunFam serine/threonine-protein kinase D6PK-like 597 720 - -
Viun5g00664 768 ProSiteProfiles Protein kinase domain profile. 370 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00664 768 MobiDBLite consensus disorder prediction 121 137 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 36 56 - -
Viun5g00664 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Viun5g00664 768 SMART serkin_6 370 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00664 768 FunFam serine/threonine-protein kinase D6PK-like 454 521 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 295 343 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 94 109 - -
Viun5g00664 768 PANTHER FLIPPASE KINASE 1-RELATED 127 726 - -
Viun5g00664 768 Pfam Protein kinase domain 371 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00664 768 Pfam Protein kinase domain 599 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00664 768 Gene3D Transferase(Phosphotransferase) domain 1 454 521 - -
Viun5g00664 768 SUPERFAMILY Protein kinase-like (PK-like) 352 719 IPR011009 -
Viun5g00664 768 FunFam Serine/threonine-protein kinase D6PK-like 368 453 - -
Viun5g00664 768 Gene3D Phosphorylase Kinase; domain 1 368 453 - -
Viun5g00664 768 Gene3D Transferase(Phosphotransferase) domain 1 598 720 - -
Viun5g00664 768 MobiDBLite consensus disorder prediction 90 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00664 Viun-Chr5 4039833 4044089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00664 1 768 AGC Kinase Gene Family AT2G44830 64.981 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Viun5g00664 Pkinase 8.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00664 - - gmx:100800019 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g00139 10 855401 860086 Viun5g00664 5 4039833 4044089 PCT