Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00642 ATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTATCTGCTGAACAAGAAGCACAACACATTGTTTCCAATGCAAGAAATTTGAGGACCCAAAGGTTGAAGCAGGCAAAGGATGAGGCTGAGAAAGAGGCTGCACAATACAGATCTCACATGGAAGATGAGTATCAAAATTCAATTTCAGAGACCACAGGGACTTCTGGATCTAATGTAAAAAGGCTTGAGGAGGAGACAGAGGACAAGATTAAACATTTAAAGAAAACAAGTTCAGAGGTCTCATCAGAAGTGGTTGAAATGCTGCTCAAGTGTGTTACAAATATCAAAATATAA 333 0.3994 MDPFKGQGGIQMLLSAEQEAQHIVSNARNLRTQRLKQAKDEAEKEAAQYRSHMEDEYQNSISETTGTSGSNVKRLEEETEDKIKHLKKTSSEVSSEVVEMLLKCVTNIKI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00642 110 SUPERFAMILY F1F0 ATP synthase subunit B, membrane domain 11 57 IPR028987 -
Viun5g00642 110 NCBIfam V-type ATPase subunit G 8 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Viun5g00642 110 Coils Coil 32 59 - -
Viun5g00642 110 Gene3D - 3 110 - -
Viun5g00642 110 MobiDBLite consensus disorder prediction 53 72 - -
Viun5g00642 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Viun5g00642 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Viun5g00642 110 Coils Coil 72 92 - -
Viun5g00642 110 MobiDBLite consensus disorder prediction 38 75 - -
Viun5g00642 110 FunFam V-type proton ATPase subunit G 3 110 - -
Viun5g00642 110 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00642 Viun-Chr5 3923851 3924932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00642 1 109 Primary Pumps ATPases(2) AT3G01390 56.881 9.71e-32 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00642 K02152 - gmx:100818549 168.318