Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00637 ATGAGAATTGCTAGCCATCCTTCTTCTTCTTCGTCCTCCTCAGGTTGGTCGCATTTCTGGTCGTCGGCGCGCCGATCGAAGCGCCTAGCGACGCCGGCGGAGAAGGCCTATCGCGACAGCACTGAGCTCGGCCTCTCCCGCCGCCTCGGCGTCATCGACCTCATACTCCTTGGGATTGGCGCATCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCCCGCGACGCCGGACCCGGAGTGACGATAAGTTTTATGCTTGCGGGAGCATCGTGTGTTATAAATGCACTCTGTTATGCTGAACTAGCTTCTCGTTTTCCCGCTGTTGTTGGAGGAGCTTATCTATATACATACACGGCTTTTAATGAACTTACGGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCACATTGGAGCAGCGAGTATAGCGAGAAGCCTAGCAAGTTATCTGATAAATATTCTAGAACTCTTTCCTGTTTTCAAAGATAACATTCCAAATTGGATTGGGCATGGTGAAAGCATTGGAGATGTGTTATCCATCAACATATTGGCTCCTATTCTGCTAATACTTCTCACTTTAGTTCTATGTCTAGGTGTTCATGAATCGTCAATTATGAATTGTATTATGACAGTGACCAAGGTAATCATTGTTATCATTGTCATTTTTGCTGGAGCATTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTACAATCTATACTTACAGGAGCTACAGTAGTCTTCTTTGCATACGTTGGTTTTGATGCAGTTGCCAATTCTGCCGAAGAAGCTAAGAGGCCTCAGCGGGATTTGCCAATTGGCATAATAGGAAGCCTCTTAGTATGTATTGCATTGTACATTGGAGTATGCTTGGTTATTACTGGAATGGTTCCATACAATCTTCTAGGAGAAGATGCTCCTCTGGCTGAAGCTTTTACATCTAAGGGATTAAAATTTGTTTCTGTTCTGATTAGCATTGGTGCTGTTGCGGGACTTACAACAACACTCCTTGTTGGTCTCTATGTTCAGTCTCGGCTATATCTTGGACTTGCCAGGGATGGCTTACTTCCCTCAATATTTGCAAAGGTTCACTCCACACGCCACACCCCTATTCATTCTCAGATCTGGGTTGGCTTGGTTGCCAGCGTTCTGGGTGGGCTGATGGATGTGCGTGTGCTCTCTCACATTCTTTCCGTTGGTACACTGACTGGATATTCAGTTGTCTCAGCATGTGTTGTTGTACTTCGCTGGAAGGATAAGACAAGTAGTCAAGTATCGTCTTCTGCTGAGCGGGAAGGTGTAATTTGCCTCATTGCCGTTGCTCTTTGTGGATTTGCTACTGGGCTCTTGTACCGTTATGATGCTTCATTTATTTTTCTGATTCTCACCATAGTTATCGCAGTTGGTGCTTCTGTTGCTCTCATTTTCCGCCAGGTTTACGCAGACGCACCAGGGTTTTCCTGCCCAGGGGTTCCCATTCTGCCAAATATTTGCATATTTTTCAACATGTTCTTATTTGCCCAGTTACATGAAGAGGCATGGGTGAGATTTGTGGTTCTTTGTATTGTCATGATTGGTGTTTATGCAATATATGGGCAGCATCATGCGAACCCCAGTGCAGAAGACAATCTCTATATTGAGGCACCTGTGGAAGAAGATCCGTGA 1686 0.4561 MRIASHPSSSSSSSGWSHFWSSARRSKRLATPAEKAYRDSTELGLSRRLGVIDLILLGIGASIGAGIFVVTGTVARDAGPGVTISFMLAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFAQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPNWIGHGESIGDVLSINILAPILLILLTLVLCLGVHESSIMNCIMTVTKVIIVIIVIFAGAFEVDVSNWSPFAPNGLQSILTGATVVFFAYVGFDAVANSAEEAKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLAEAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLARDGLLPSIFAKVHSTRHTPIHSQIWVGLVASVLGGLMDVRVLSHILSVGTLTGYSVVSACVVVLRWKDKTSSQVSSSAEREGVICLIAVALCGFATGLLYRYDASFIFLILTIVIAVGASVALIFRQVYADAPGFSCPGVPILPNICIFFNMFLFAQLHEEAWVRFVVLCIVMIGVYAIYGQHHANPSAEDNLYIEAPVEEDP 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00637 561 Pfam C-terminus of AA_permease 493 542 IPR029485 -
Viun5g00637 561 Gene3D Amino acid/polyamine transporter I 45 485 - -
Viun5g00637 561 PIRSF AA_transporter 34 489 - -
Viun5g00637 561 PIRSF AA_transporter 441 555 - -
Viun5g00637 561 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 40 543 - -
Viun5g00637 561 Pfam Amino acid permease 49 473 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00637 Viun-Chr5 3896723 3903134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00637 11 486 Organic Solute Cotransporters AT1G05940 71.726 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00637 5 3896723 3903134 Viun5g00637 5 3896723 3903134 ECH
Viun4g02564 4 40531909 40534250 Viun5g00637 5 3896723 3903134 PCT