Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g00604 | ATGTCTAGCCCTAGTAGTCCAGAGATAGAAGAGAAGAGAGTTACACAGGAAGATAAAGTCAAATCTGCTAAAACTGAAATGGGTGAGGTGAGGGAAGAGAATGAGAGATTGAAGAAGACGCTGGAAAGAGTAGAAAAGGATTACCACTCCCTTCAACTCCGTTTCTTTGACATCCTTCACAAAGATGTTCCAAACAAGGGTGTGCTTGATTCATCTACTTCCCATGATGATCAAAGCGAAGAGCCTGAGTTTGTCTCACTTAGCCTTGGAAGGAGTCCAACGGAGCCTAAGAAGGAGGCAAGAATCGGAGACTTTAACAAACCGACAGAAGAAAACGTTGGACCCAACCTTACTCTTGGATTAGACTCCAAACACTTGTTGGAGATGGAGGTTGTGTCAGATTTGAGTCCGATGAACAGCTCAGAAGAACCAAAGGAAACGGTGACAGAGGGAACTTTGTCAACAAATCAATCAGCAAAAGTGATAAATGTGAATACCGACATTTCAGATCAAATGCCAGCCAAGAGAGCAAGGGTGTCTGTGAGAGCTAGATGTGAGACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATTGCAAAGGGAAATCCATGCCCGAGGGCATACTATCGTTGCACAGTTGCACCAACATGCCCAGTGCAAAGGTGTTCCCAGGACCTGTCCATCTTAATCACAACCTATGAAGGAACCCATAACCACCCACTTCCGGTCTCAGCCACAGCCATGGCTTCAACAACTTCTGCTGCAGCTTCCATGCTATTGTCAGGTTCTTCAACATCTTCAAGCCACATCTCTGCATCTTTTGGAAATGGTCTAAGTTTCAGTGACCAGTTTAATGAATCAAGACCCAAACAAATGTTCTCACCACCAAGCCATGCCTCACCACATATGTTCTCAACAATCACTCTAGACCTTACTTCTTCAGCTCCTTCCTCCTCATCAACTCAATTCCACCGTGGCTTAACTTCAACCGTGGCTCCAATTTCAAACCCAAGATCCTCACCCAGTCTCAGCTTTTGTTCACCGGAGCATAACTTCATACCATCCATTTGGGGTAAGGGGTTCCATGATAATGCCACAACCACGACACCAATTGACAAAATCCCCACAAGGCCAATTATGCAGCCAAATAATTTCCAACAACATTTCTACCAACAATGTACAACAAACCAACAAACTCCCTCCCGAGAAGCTTTGGCAGAAACAATAACCAAAGCAATCAGCACAGACCCGAGTTTTCGTTCAGTCATAGCTGCTGCGGTTTCATCGATAGTGGAATCAAACAGTGGTAAACAAGAGGTAACAGAGAATGTTCTTGGTTCAGGGTTGAACTTAAAACTTGGGGAGCATCTTCAACTGGCTTCACCTAGTCCCTTAACTGGCTACTTCAAAAGTTTGGCCTCTAAAAGTTCCGAGGCTGGAAACTTCATTCTTCTCCAACCACCATTGCCATTTTCTTTCTCCAAGAATGTCACAAATCAGATCAACCGCTACGTTCCAGAAATGAACACGCATCACTAG | 1554 | 0.4459 | MSSPSSPEIEEKRVTQEDKVKSAKTEMGEVREENERLKKTLERVEKDYHSLQLRFFDILHKDVPNKGVLDSSTSHDDQSEEPEFVSLSLGRSPTEPKKEARIGDFNKPTEENVGPNLTLGLDSKHLLEMEVVSDLSPMNSSEEPKETVTEGTLSTNQSAKVINVNTDISDQMPAKRARVSVRARCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPTCPVQRCSQDLSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSSSHISASFGNGLSFSDQFNESRPKQMFSPPSHASPHMFSTITLDLTSSAPSSSSTQFHRGLTSTVAPISNPRSSPSLSFCSPEHNFIPSIWGKGFHDNATTTTPIDKIPTRPIMQPNNFQQHFYQQCTTNQQTPSREALAETITKAISTDPSFRSVIAAAVSSIVESNSGKQEVTENVLGSGLNLKLGEHLQLASPSPLTGYFKSLASKSSEAGNFILLQPPLPFSFSKNVTNQINRYVPEMNTHH | 517 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g00604 | 517 | MobiDBLite | consensus disorder prediction | 134 | 153 | - | - | |
Viun5g00604 | 517 | SMART | WRKY_cls | 190 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g00604 | 517 | MobiDBLite | consensus disorder prediction | 69 | 117 | - | - | |
Viun5g00604 | 517 | Coils | Coil | 13 | 54 | - | - | |
Viun5g00604 | 517 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Viun5g00604 | 517 | SUPERFAMILY | WRKY DNA-binding domain | 183 | 247 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g00604 | 517 | Pfam | WRKY DNA -binding domain | 191 | 245 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g00604 | 517 | ProSiteProfiles | WRKY domain profile. | 185 | 247 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g00604 | 517 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 11 | 443 | IPR044810 | GO:0003700 | |
Viun5g00604 | 517 | Gene3D | WRKY domain | 175 | 248 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g00604 | 517 | MobiDBLite | consensus disorder prediction | 10 | 36 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g00604 | Viun-Chr5 | 3664654 | 3667427 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g00604 | 27 | 445 | WRKY Transcription Factor Family | AT5G15130 | 44.396 | 2.35e-80 | 258 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Viun5g00604 | WRKY | 3.9e-18 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g00604 | - | - | gmx:100780402 | 719.539 |