Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00580 ATGTCAAAAAAAATTTCGTACAATCCTTCCTTGAGTGTACCTTTTCTCAATGATGAGGAGAAAGCCATAGCCTCTTATTCTTCTGCCAAAAATACTGTATCCTTCTTCCGTACATGCCTTAATGGACTCAATACAATAGCAGGTGTTGGCATACTCTCAGTTCCATATGCTCTTGCAACAGGAGGCTGGTTAAGCCTGGCTCTTCTGTTTTCTATTGCTGCTGCTGCATTTTACACGGGTCTTCTGATTAAAAGATGCATGGATAAGGACTCAAACATTAGAAGCTACCCTGATATAGGTGAACTTGCATTTGGAAAAACAGGGAGACTAATAGTGTCAGTATCCATGTACACGGAACTATATCTTGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGTAACATGTTCCCCATTGGGGAGGTTCAGATAGCAGGCCTAACAATTGGTGGGAAGCAAATATTTGTGATAATGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTTTTTGCTTCTGTTCTCATCATCGTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTCGTGCATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTCTGTTATTGCGCACATCCTGTCTTTCCCACATTGTACAATTCCATGGCAAACAAACATCAGTTCTCTAACGTCCTAATTGTATGTTTTGTCCTAACCACTGTGGGTTATGCATCGATGGCTATAGTGGGTTATTTAATGTTTGGTGACGGGGCTGAATCACAAATAACATTGAACCTGCCTCTGGACAAAGTTAGCTCAAAGTTAGCAATATACACAACCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTGAAAGACTTGCTTCCGAAAACGTACAAGAATAGGGTGACGAGCATCTTACTAAGCACAGTGTTGGTAATGAGCACCACCGTTGTTGCTCTTGCTGTCCCTTTTTTTGGGTCTCTCATGTCTCTGATTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCGGGCACTTACAAGAAATTTGGGTGTGAGACGGTAGCTATAGTGATGATAATAATGATAGCTATTGTAATGGCAATTTCTGGGACCTACATCTCTCTCGTGGAAATAGCCCACAATTTGTAA 1266 0.4115 MSKKISYNPSLSVPFLNDEEKAIASYSSAKNTVSFFRTCLNGLNTIAGVGILSVPYALATGGWLSLALLFSIAAAAFYTGLLIKRCMDKDSNIRSYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNMFPIGEVQIAGLTIGGKQIFVIMVALIILPTVWLDNLSLLSYVSASGVFASVLIIVSITWTATFDGVGFHHKGTLVHWNGLPTAVSLYAFCYCAHPVFPTLYNSMANKHQFSNVLIVCFVLTTVGYASMAIVGYLMFGDGAESQITLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPKTYKNRVTSILLSTVLVMSTTVVALAVPFFGSLMSLIGAFLSVTASILLPCLCYLKISGTYKKFGCETVAIVMIIMIAIVMAISGTYISLVEIAHNL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00580 421 Pfam Transmembrane amino acid transporter protein 32 412 IPR013057 -
Viun5g00580 421 PANTHER OS05G0424000 PROTEIN-RELATED 40 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00580 Viun-Chr5 3402517 3404249 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00580 19 417 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.250 2.38e-172 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00580 K15015 - gmx:100794374 672.544