Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00532 ATGGATGGAGGAACTGAAGAAGGTAGTGATGCAGGCATGGATATGTTTTTAAGAAATTATAAAGTGGGAAAAACACTTGGCTTTGTATCTATGTTGGGGAAGATGAAAATTGCAGAACATGTGTTGACTGGGAAGAAGGTCATCATCCAGATCCTTAAACGTGACAATATAAAGAATATGAAAATGGAAGAACAAGTGAAATTAGAACATGGAATTTTAAGATTACTTAAGCATCCTAGCATCATAAAACTTCATGAGGTCATAGAAACTCCAACTGACATATGTGTTGTTATGGAGTATGCTTCCAAAGAGCTTTTTGATTACGTAATAGAAAGGGGTAGGTTAGAAGAAGATGAAGGTCGTAATATTTTTCGGCAGATAATCTCTGGAGTGGAGTATTGTCACAATAAAATGGTGGTTCATAGAGATTTGAGACCTGAAAACATACTTCTGAACTTCGTTTGTGATGTCAAGATAACTGGTTTTGGCTGGAGCAACATCATGCATGGTGGTCACTTTCTTAACACAAGTGGTGGAAGCTCTAATTATGGAGCTCCTGAGGTTATGTGCAGAAAATTATATATTGGACCTGAAGTTGATGTATGGAGTTGTGGTGTAGTTCTGTATTTTATTCTTTGTGGAATTCTACCTTTTGACGATGAAAACATTCCAAATCTCTTTACCAAAATAAAGGGAGGGGTTTTCACTCTTCCATCTTACCTATCTCCCGAAGCTAGAGATTTGATATCAAAGATGCTTAATGTGGAACCTATCAAAAGGATAACAGTATCTGAGATCCAACAACACCCATGGTTGCAACTTCATCTTTGA 831 0.3694 MDGGTEEGSDAGMDMFLRNYKVGKTLGFVSMLGKMKIAEHVLTGKKVIIQILKRDNIKNMKMEEQVKLEHGILRLLKHPSIIKLHEVIETPTDICVVMEYASKELFDYVIERGRLEEDEGRNIFRQIISGVEYCHNKMVVHRDLRPENILLNFVCDVKITGFGWSNIMHGGHFLNTSGGSSNYGAPEVMCRKLYIGPEVDVWSCGVVLYFILCGILPFDDENIPNLFTKIKGGVFTLPSYLSPEARDLISKMLNVEPIKRITVSEIQQHPWLQLHL 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00532 276 ProSitePatterns Tyrosine protein kinases specific active-site signature. 139 151 IPR008266 GO:0004672|GO:0006468
Viun5g00532 276 SUPERFAMILY Protein kinase-like (PK-like) 17 273 IPR011009 -
Viun5g00532 276 PIRSF ILK 24 269 - -
Viun5g00532 276 Gene3D Transferase(Phosphotransferase) domain 1 11 276 - -
Viun5g00532 276 SMART tyrkin_6 20 272 IPR020635 GO:0004713|GO:0006468
Viun5g00532 276 Pfam Protein kinase domain 32 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00532 276 FunFam Maternal embryonic leucine zipper kinase 11 275 - -
Viun5g00532 276 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 19 273 - -
Viun5g00532 276 ProSiteProfiles Protein kinase domain profile. 20 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00532 Viun-Chr5 3082491 3085547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00532 20 272 CBL-interacting serine-threonine protein kinases AT4G24400 42.353 2.03e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Viun5g00532 Pkinase 2.3e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00532 K07198 - gmx:100779991 388.652