Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00497 ATGGAGTACGGCAATTGGGCTGAATCGCTGCAAACCGAAACCCCACTCTTCTCTTTCCCTCAACCTTCCTCATCATCTTATGCTCCTCCACCATCTCAGACCACCCATTACCCCTCTTATTCTCAAAACCCTAACCCCTCTTCCTCTCTTCCCCTCAAACCTCCTGGGGTTGATTCCCTTCCGCCGTCGAACCCTATTGTGTATTCAAATCATGAATCTGTTCCCATTCCCAGTTTGATCTATCCCCAGACCCATGCTGGGGCTGATTCCAATTCTGGGTACTATGTAAACCAGAACTGGGCTGCCAGAGAGGCTGTTAGGCAATTTGGTTCTGACCCAACTGTCTATGCACCTGGCATCTCTATACCATCCAATGACTCAGAACAATTGGCTATGTGGTGGGCAAATACTGCAGCTCAACTTCATGGCAATGGAATACTGAGTAAAAAACAAAAGAAAGCTAAAACTAAGGTTGTGCAACCTGCATATTGTGAAGTTTGCAAGATAGAATGCACTGGAAAGGAAGTGCTGGACCAACATAAATTAGGAAAGAAGCACAAGAGGAACTTGGAAAAACTAAGAGAATCATTGAAACCAACCCAAGTTCAACCATCTGGGTCATCTAATCCTGTAATAGGACCCCAGTTACCAGACAACAAGAGCAAATCAATCAGTGGGAACAAGATTAAGAGAAAAAAAGCTGAAACCATTGAAGACTTGGAGAAAAAGAAAAAGAAGGTTCTTGATGGCGGGGCAGCAGCTGAAGCAGTTAAGATATGTGCTATATGTAACGTGGTGTGTAATAGTGAGACAGTCTATAATTATCATCTTACTGGACAGAAGCATGCTGCTATGCTGAAGAAAACATATGCCAGTTGA 879 0.438 MEYGNWAESLQTETPLFSFPQPSSSSYAPPPSQTTHYPSYSQNPNPSSSLPLKPPGVDSLPPSNPIVYSNHESVPIPSLIYPQTHAGADSNSGYYVNQNWAAREAVRQFGSDPTVYAPGISIPSNDSEQLAMWWANTAAQLHGNGILSKKQKKAKTKVVQPAYCEVCKIECTGKEVLDQHKLGKKHKRNLEKLRESLKPTQVQPSGSSNPVIGPQLPDNKSKSISGNKIKRKKAETIEDLEKKKKKVLDGGAAAEAVKICAICNVVCNSETVYNYHLTGQKHAAMLKKTYAS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00497 292 MobiDBLite consensus disorder prediction 194 230 - -
Viun5g00497 292 Gene3D Classic Zinc Finger 223 289 - -
Viun5g00497 292 Gene3D Classic Zinc Finger 146 193 - -
Viun5g00497 292 MobiDBLite consensus disorder prediction 14 47 - -
Viun5g00497 292 MobiDBLite consensus disorder prediction 14 68 - -
Viun5g00497 292 Pfam Zinc-finger of C2H2 type 163 186 - -
Viun5g00497 292 Pfam Zinc-finger of C2H2 type 259 282 - -
Viun5g00497 292 SUPERFAMILY beta-beta-alpha zinc fingers 156 194 IPR036236 -
Viun5g00497 292 PANTHER ZINC FINGER PROTEIN 385B-LIKE 18 289 - -
Viun5g00497 292 SUPERFAMILY beta-beta-alpha zinc fingers 257 289 IPR036236 -
Viun5g00497 292 MobiDBLite consensus disorder prediction 196 223 - -
Viun5g00497 292 SMART ZnF_U1_5 255 289 IPR003604 GO:0003676|GO:0008270
Viun5g00497 292 SMART ZnF_U1_5 159 193 IPR003604 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00497 Viun-Chr5 2955310 2958274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00497 158 291 C2H2 Transcription Factor Family AT5G61190 34.328 1.22e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00497 - - gmx:100814580 384.415