Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00473 ATGGCTGTAGAGGAGTCTGAGTCTGTGATTGGGGAGCTAGAAAGAGAGGAGAACTTGATTGCTGCAGTAAGGCATATTGTGAAGGCACTAGGGCCGAATAAGACCCTTACCAGTGATGCCAAGAAAATTCTGGCAGATCTTGGGACTAGATTGTCCTCCATGTCCGTACCTAGTGAGAAGGAGGAGGGAAAACAAGGACAAGGAGGGGAGGGCGGTGATGATCATGATGGTGGTGCTGATGATGATGATGATGATGATGATGATGATGATGATGAGGGTCTTAGTGCTATTGAAGAAAGACTTAATGTGATTCAGGAGAAAATTATGAGATGGGAAGAGGATCAGTCCATGATTTGGGATTTGGGAACTGAAGAAGCATCTGAGTATCTGAATGCTGCTAACGAGGCCCGCAGGTTGATTGAGAAGTTGGAAAGTTTGCATTTGAGGAAAGAGGATCAAGAGTACGAGTTTATGCAGAGGGCCTATAGTGTTCTTCAAACTGCTATGGCACGCCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAGCCTGAATATGTTTCTTTTCGTTCCAGTGAGGAAGATGCTGTTGATGAGAACTCCATAATCTCTATAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCGTCAGAGGAGCATATCATTGATTTGGTTCATCCGGCCGTGATCCCGGATCTCAGGTGTATTGCAAACTTACTTTTTGCTTCAAATTATTGCCAGGAATGTTCCAATGCTTATATCATTGTCCGGAGGGATGCCCTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATCGAGGACGTTCTGAAAATGGAGTGGGGTACTTTGAATTCCAAAATCAAAAGATGGATTTGGGCTGTCAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTGGTCTATCTTGTTTTGTTGATGCATCTAAGGCTTCGATATTGCAGCTTCTGAATTTCGGTGAAGCCATGTCCATTGGCCCTCACCAACCTGAGAAATTGTTCCGTGTTCTTGACATGTACGAGGTTCTGCAAGACCTTATGCCAGACATTGATGCTTTGTACACAGATGAGGTTGGTTCCTCGGTTAAAATTGAATGTCATGAAGTTCTGAAGAGACTAGGCGATTGTGTGAGGGCAACATTTTTTGAATTTGAAAATGCCATTGCAACAAATGTATCATCAACCCCTTTTGTTGGTGGTGGGATACATCCTTTAACCAAATATGTTATGAATTATCTCAGAACCCTTACAGACTACAGTGACATACTCAATCTACTTCTGAAGGACCAGGAAGAGGAGAAATCCATTTCGCTGTCACCTGACATGAGCCCTGGTACAGAAGAAGATAGCAGAAGCCAGGGATCTCCATGTAGAGTTTCCTCAATGGCCCTTCACTTTCGATCACTCGCATCTATCTTGGAAAGCAACCTCGAAGAGAAGTCTAAGTTGTACAAAGAAGTCTCCTTGCAGCACTTGTTCTTGATGAACAACCTGCATTATATGGCTGAAAAGGTGAAGGGGTCTGAACTCAGGCTGGTATTTGGAGATGAATGGATTCGAAAGCGCAATTGGAAGTTTCAGCAGCATGCAATGAAGTATGAGAGGGCTAGTTGGAGTTCCATTCTTTTCTTACTAAAGGATGAAGGGATTTTTGTTCCGGGTACAAGTTCGGTCTCAAAAAGTCTTCTTAAAGAGAGGCTACGAAGCTTCTACCTTGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGCTTATCCCAGATATTCAGCTTCGCGAAGATTTAAGGATTTCTATATCTCTCAAAGTAATCCAAGCTTATAGAACTTTTGTTGGAAGGCATAACACTCACATAAGTGACAAAATCATTAAGTACAGTGCTGATGATTTAGAAAACTTCCTTTTGGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCTCATAGAAGGTAG 2055 0.4282 MAVEESESVIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLGTRLSSMSVPSEKEEGKQGQGGEGGDDHDGGADDDDDDDDDDDDEGLSAIEERLNVIQEKIMRWEEDQSMIWDLGTEEASEYLNAANEARRLIEKLESLHLRKEDQEYEFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSSEEDAVDENSIISIGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDLRCIANLLFASNYCQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVGLSCFVDASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLQDLMPDIDALYTDEVGSSVKIECHEVLKRLGDCVRATFFEFENAIATNVSSTPFVGGGIHPLTKYVMNYLRTLTDYSDILNLLLKDQEEEKSISLSPDMSPGTEEDSRSQGSPCRVSSMALHFRSLASILESNLEEKSKLYKEVSLQHLFLMNNLHYMAEKVKGSELRLVFGDEWIRKRNWKFQQHAMKYERASWSSILFLLKDEGIFVPGTSSVSKSLLKERLRSFYLGFEDVYRIQTAWLIPDIQLREDLRISISLKVIQAYRTFVGRHNTHISDKIIKYSADDLENFLLDFFEGSQKWLQNPHRR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00473 684 PANTHER EXOCYST COMPLEX PROTEIN EXO70 93 673 IPR004140 GO:0000145|GO:0006887
Viun5g00473 684 Coils Coil 94 114 - -
Viun5g00473 684 MobiDBLite consensus disorder prediction 468 489 - -
Viun5g00473 684 SUPERFAMILY Cullin repeat-like 115 672 IPR016159 -
Viun5g00473 684 Gene3D Exocyst complex component Exo70 106 679 - -
Viun5g00473 684 MobiDBLite consensus disorder prediction 75 92 - -
Viun5g00473 684 MobiDBLite consensus disorder prediction 49 92 - -
Viun5g00473 684 Coils Coil 126 182 - -
Viun5g00473 684 Pfam Exo70 exocyst complex subunit 302 668 IPR046364 GO:0000145|GO:0005546|GO:0006887
Viun5g00473 684 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00473 Viun-Chr5 2812035 2814853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00473 12 684 EXO70 exocyst subunit family AT3G29400 49.347 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00473 K07195 - gmx:100799102 1215.68