Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00467 ATGGCACAAGTTCAAGACAGAGACAACACCCGCAACAACCATCATTACATTTCTTCAGCACCCACAACAACAGCACAATCTCCAATGAACAATTTGCCCCGAGATCTGTTGAGGAGCTTCATGGGAGTGAACAATCATCACGGCCACCATGGTAATCATCAGAATTTGCCTGTACCGGTGGTGAAGTTAGAGGAAGAAGAGGAGTTGGAACTAAGTCTCGGGCTTTCGATGAATGGTCGATTTGGGGTGGACCCCACCGCCAAGAAGATAAAGAGAACTACGTCGATTCCGGAGTTCGTGAGGGACGAGATGGGGTACGCTGTTGTGCAGTGCACGGCGCCTCTGGTGAGGACGTGCTCGCTGCCGACGGAGACGGAGGAGGAGTGGCGGAAAAGGAAGGAGTTGCAGACGCTGCGCCGCATGGAGGCGAGGAGGAAGCGCTCCGAGAAGCAGAGGAATTTGAAGGCTCTCAGAGAGCAACAGCAACAACAGCAACCAAGGGTTGGGTCTGAAGGGAATAATCCTGTGGAACAAAGTGCAGGGGCTTACGCTGAGGGTGCCCCCCTGGGGAGAACCGTGTCGTTGACCACACGCGTTTGTGGACTCGGTTTGAATGGGGACAGCGAGAAAGAGAAGAAGGAAAAGGGTGGAGTGGTGTTGGCGCCTCCATCGCCTTCGCAGGGTTCCATTGGTTCTTCGGGAACCTCAGAAGTTGAGTCTCGACAAGGTCAAGGACCAACACCAATAGATGTTAGAAGCCCTACTAGTGGCAACTTGCAGCCAGATAGTGAGCTGAAATCAGCAATTGCAGCCCAAGCAAGTGTTGCAGAGAATGGTAGCAAGAATGCTGGTGCAGTGGGTGTGAGAAGTGAATCTAACAAGCATTCAGTACCCCAGAACAGAACCAAAGACATTGTGAGGAACTTGTTGGAAGACATGCCCTGTGTCTCCACAAAAGGTGATGGTCCTAATGGAAGAAGGGTAGAAGGTTTTCTTTACCGGTATGGGAAAGGTGAGGAAGTGAGGATAGTGTGTGTTTGCCATGGCAGTTTTCTCACCCCTTCAGAGTTTGTTAAGCATGCTGGTGGCGGTGACGTGGCAAATCCATTGAAGCATATTGTTGTTAGTCCAAGCATTTTGTGA 1143 0.5118 MAQVQDRDNTRNNHHYISSAPTTTAQSPMNNLPRDLLRSFMGVNNHHGHHGNHQNLPVPVVKLEEEEELELSLGLSMNGRFGVDPTAKKIKRTTSIPEFVRDEMGYAVVQCTAPLVRTCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNLKALREQQQQQQPRVGSEGNNPVEQSAGAYAEGAPLGRTVSLTTRVCGLGLNGDSEKEKKEKGGVVLAPPSPSQGSIGSSGTSEVESRQGQGPTPIDVRSPTSGNLQPDSELKSAIAAQASVAENGSKNAGAVGVRSESNKHSVPQNRTKDIVRNLLEDMPCVSTKGDGPNGRRVEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANPLKHIVVSPSIL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00467 380 Pfam Tify domain binding domain 341 375 IPR032308 -
Viun5g00467 380 MobiDBLite consensus disorder prediction 139 156 - -
Viun5g00467 380 MobiDBLite consensus disorder prediction 203 262 - -
Viun5g00467 380 Pfam Putative nuclear localisation signal 115 188 IPR032310 -
Viun5g00467 380 MobiDBLite consensus disorder prediction 139 178 - -
Viun5g00467 380 Pfam Ethylene-responsive binding factor-associated repression 64 98 IPR012463 -
Viun5g00467 380 MobiDBLite consensus disorder prediction 14 32 - -
Viun5g00467 380 MobiDBLite consensus disorder prediction 1 32 - -
Viun5g00467 380 Coils Coil 131 160 - -
Viun5g00467 380 MobiDBLite consensus disorder prediction 225 262 - -
Viun5g00467 380 MobiDBLite consensus disorder prediction 157 177 - -
Viun5g00467 380 PANTHER AFP HOMOLOG 2 33 378 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00467 Viun-Chr5 2756332 2759156 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00467 - - vun:114185130 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00467 5 2756332 2759156 Viun5g00467 5 2756332 2759156 ECH