Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00465 ATGGCTTCAAATAATGGCCTTAAAGCAAGTGAGATGTTTGAAGGTCAAGTTCACTTATACAAACACTTGCATGCTCATGCAGTAGATGGTATGAGTATTAGATGGATGATTGAGCTTGGCATACCTGACATAATCCACAACCATGATCAACCCATTACACTATCAGAGTTGGTATCCATTCTACAAATTCCGCCAACTAAAGTTAGAGGCGTGCACAGTCTCCTACGCTATCTGGCACACAATGGATTCCTTCAGATTGTAAGAGTCCATCACAACACACAAGAAAAGGAAGCATATGCTCTAACTGCTGCATCACAGCTTCTTGTCAAAGGCACTAACCTTAGTCTTACGCCAATGGTGGAGTATTTAATTAACCCAAGTGGATCACCCGTATGGTCTCACTTGAAGAAGTGGACTTATGAGGATGATCTTACACTGTGTGATGTCTCCCTAGGATCAAATATATGGGATTTTCTTGGTAAAAACACAGAAAAAAACAAGTTGTTCAATAAGGCAATGGCTAGTGATTCTCAGATGATGAACGTGGCATTAAGAGGTTGCAATTGGGTGTTCGAAGGAGTGGAGTCCATTGTTGATGTTGGAGGTGGAAACGGAACCACAGCCAAGGCTATCTCTGATGCATTTCCAAACGTGAAGTGCACTGTGTTAGACCGTCCACAAGTTGTGGAGAACTTGTTGGGTACCAACCATTTGAAATATGTTGGTGGTGACATGTTCAAATCTATTCCCAAGGCTGATGCAATTCTACTCAAGTGGATTTTGCATAATTGGAGTGACATGGATTGTAAGAAGATATTAGAAAATTGCAAAGAAGCTATTTCTGGTAAAGGTAAGAGAGGAAAAATAATTGTGATAGAAACTGTGATAAACGAAGGTCAAGATGAGCATGGAATTACTAGTCTAAAGCTCCTCATGGATGTGAAAATGTCATGTCTTGTTAATGGGAAAGAAAGAAGTGAAGAAGAATGGAAGAAACTGTTCGTGGAAGCAGGATTCCAAAGCTACAAAATATCTCCTTTAACGGGATATTTGTCTCTTATTCAAATCTATCCTTGA 1077 0.3993 MASNNGLKASEMFEGQVHLYKHLHAHAVDGMSIRWMIELGIPDIIHNHDQPITLSELVSILQIPPTKVRGVHSLLRYLAHNGFLQIVRVHHNTQEKEAYALTAASQLLVKGTNLSLTPMVEYLINPSGSPVWSHLKKWTYEDDLTLCDVSLGSNIWDFLGKNTEKNKLFNKAMASDSQMMNVALRGCNWVFEGVESIVDVGGGNGTTAKAISDAFPNVKCTVLDRPQVVENLLGTNHLKYVGGDMFKSIPKADAILLKWILHNWSDMDCKKILENCKEAISGKGKRGKIIVIETVINEGQDEHGITSLKLLMDVKMSCLVNGKERSEEEWKKLFVEAGFQSYKISPLTGYLSLIQIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00465 358 PANTHER O-METHYLTRANSFERASE 12 343 IPR016461 GO:0008168
Viun5g00465 358 FunFam O-methyltransferase ZRP4 110 358 - -
Viun5g00465 358 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Viun5g00465 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Viun5g00465 358 CDD AdoMet_MTases 197 296 - -
Viun5g00465 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Viun5g00465 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Viun5g00465 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Viun5g00465 358 Gene3D - 1 108 IPR036388 -
Viun5g00465 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Viun5g00465 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00465 Viun-Chr5 2733940 2735402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00465 22 344 Monolignol Biosynthesis Gene Families AT5G54160 29.909 1.15e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00465 K22588 - gmx:100811609 521.931