Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00464 ATGGTGGTTGGCGCTGTCGCCGGTGGCCGTGCAAAGAGCAAACGTTGGTGGGCAGCGTTGGTGCGGCGTTGGTGCTTTAGCCGAAGGAAGAAGATGAAGTTGGGGGGAAATTATATTATTAGGTGTTGGGAAGGAGTGAAGCCCATTGTGGATGTCGGAGGTGGAACTAGAACCACAGCCAAGGCTGTCTCTGATGCATTTCCAAACGTGAAGTGCATTGTGTTTGACCGTCCACAAGTTGTGGAGAACTTGTCGGGAACCAATAATTTGAGATATGTTGGTGGTGACATGTTGGAATCTATTCCCAAGGCTGATGTAGTTCTGCTCAAGTTGATTTTGCATGATTGGAATGACGAGGATTGTAATAAAATATTAGAAAATTGCAAAGAAGCTATTTTCGGTAAAGGCAAAAGAGGAAAAGTAATTTTGATAGAAACTGTGATAAATGAAGGCCAAGATGAGCATGGACTTACTAGACTAAAGCTCGCCATGGATGTGCGAATGACATGTCTTTTAAATGGAAAAGAGAGAAGTGAAGAAGAATGGAAGAAACTATTTATGGAACCAGAATTTCAGAGCTACAAAATATATCCTTTGACAAGATATTTGTCTTTGAATACTGAAGTTATAGTGATGCATTTAGTAGTTTCTTCCTTGAATGTATGGATCGAATAA 675 0.4104 MVVGAVAGGRAKSKRWWAALVRRWCFSRRKKMKLGGNYIIRCWEGVKPIVDVGGGTRTTAKAVSDAFPNVKCIVFDRPQVVENLSGTNNLRYVGGDMLESIPKADVVLLKLILHDWNDEDCNKILENCKEAIFGKGKRGKVILIETVINEGQDEHGLTRLKLAMDVRMTCLLNGKERSEEEWKKLFMEPEFQSYKIYPLTRYLSLNTEVIVMHLVVSSLNVWIE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00464 224 PANTHER O-METHYLTRANSFERASE 41 193 IPR016461 GO:0008168
Viun5g00464 224 Pfam O-methyltransferase domain 44 191 IPR001077 GO:0008171
Viun5g00464 224 Gene3D Vaccinia Virus protein VP39 31 207 IPR029063 -
Viun5g00464 224 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 214 IPR016461 GO:0008168
Viun5g00464 224 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 202 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00464 Viun-Chr5 2702407 2704855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00464 43 196 Monolignol Biosynthesis Gene Families AT5G54160 38.365 6.86e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00464 - K22588 gmx:100812688 245.358