Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00462 ATGGGTCATCATGAGTGCAATGCAAATGAGATCTTTGAAGGTCAAGTTCACTTGTACAAACACTTGCATGACCATGCAGTAGATGGTATGAGTATTAAATGGATGATTGAGCTTGGCATACCTGACATAATGCACAACCATGATCAACCAATTACACTAATAGAGTTGGTATCCATTCTACAAATTCCACAAACTAAAGTTAGAGGTGTGAAAAGTCTCCTACGCTACCTGGCACACAATGGATTCCTTCAGATTGTAAGAGTCCATCACAACACAGAAGAAAAGGAAGCATATGCTCTATCTGCTGCATCACAACTTCTTGTCAAGGGCACTGATCTTAGTCTTGCGCCAATGGTAGAGCTTTTAATTAAGCCAAATGCAGCACATGTATGGTCTCACTTGAAGAAGTGGACTTATGAGGATGGTGTTACACTATTTGATGTCTCCCTAGGATCGAATATGTGGGAGTTTCTTAGTAAAAAGCCAAAATTTAACGAGTCGTTTAATGAGGCAATGGCTTGTGATTCTCAGATGATGAATGTGGCATTAAGAGGTTGCAATTGGGTGTTCGAAGGAATGGAGTCCATTGTGGATGTCGGTGGTGGAACTGGAACCACAGCCAAGGCTGTCTGTGATGCATTTACTAACGTGAAGTGCACTGTATTTGACCAGCCACATGTTGTGGAGAAGTTGTCGGGAACCAACAATTTGACATATGTTGGTGGCGACATGTTCAAATCTATTCCCAAGGCTGATGTAGTTCTACTTAAGTTGATTTTGCATGATTGGAATGACAAGGATTGTAAGAAGATATTAGAAAATTGCAAAGAAGCTATTTCTGGTAAAGGCAAGAGAGGAAAAGTAATTTTGATAGAAACTGTGATAAATGAAGACCAAGATGAGCACGAACTTACTGGACTAAAGCTCGCCATGGATGTGCGAATGACATGTTTTTTAAATGGAAAAGAGAGAAGTGAAGAAGAATGGAAGAAAATGTTCGTTGAAGCAGGATTCCAGAACTACAAAATATCTCCTTTGACGGGATATTTGTCTCTTATTCAGATCTATCCTTGA 1074 0.3985 MGHHECNANEIFEGQVHLYKHLHDHAVDGMSIKWMIELGIPDIMHNHDQPITLIELVSILQIPQTKVRGVKSLLRYLAHNGFLQIVRVHHNTEEKEAYALSAASQLLVKGTDLSLAPMVELLIKPNAAHVWSHLKKWTYEDGVTLFDVSLGSNMWEFLSKKPKFNESFNEAMACDSQMMNVALRGCNWVFEGMESIVDVGGGTGTTAKAVCDAFTNVKCTVFDQPHVVEKLSGTNNLTYVGGDMFKSIPKADVVLLKLILHDWNDKDCKKILENCKEAISGKGKRGKVILIETVINEDQDEHELTGLKLAMDVRMTCFLNGKERSEEEWKKMFVEAGFQNYKISPLTGYLSLIQIYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00462 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Viun5g00462 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 353 IPR029063 -
Viun5g00462 357 Gene3D Vaccinia Virus protein VP39 108 357 IPR029063 -
Viun5g00462 357 PANTHER O-METHYLTRANSFERASE 18 342 IPR016461 GO:0008168
Viun5g00462 357 FunFam O-methyltransferase ZRP4 109 357 - -
Viun5g00462 357 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Viun5g00462 357 Pfam O-methyltransferase domain 131 339 IPR001077 GO:0008171
Viun5g00462 357 SUPERFAMILY "Winged helix" DNA-binding domain 9 111 IPR036390 -
Viun5g00462 357 Gene3D - 3 107 IPR036388 -
Viun5g00462 357 PIRSF O-mtase 2 357 IPR016461 GO:0008168
Viun5g00462 357 CDD AdoMet_MTases 196 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00462 Viun-Chr5 2690733 2692135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00462 21 343 Monolignol Biosynthesis Gene Families AT5G54160 31.325 1.47e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00462 K22588 K13262 gmx:100811609 493.041