Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00461 ATGGGTTCAAATCATGGGTGTAGTGCAAATGAGATCTTTGAAGGTCAAATTCACTTGTACAAACACTTGTATGCCCATGTACTAGATTCAATGAGTCTTAAATGGATGATTGAGCTTGGCATACCAGACATAATCCACAACCATCATCAACCCATTACACTTCCAGAGTTGGCGTCCACTCTTCAAATTCCGCTAACTAAAGTTAGAGGTGTGCAGAGTCTCTTACGCTACCTGGCACATTGTGGATTCCTTCAGATTGTAAGAATCCATCACCACACAGAAGAAAAGGAAGCATATGCTCTAACTGCTGCATCACAGCTTCTTCTCAAAGGCAGTGACCTTAGTCTTGCGCCAATGGTAGAACTTTTAACGAAACCACATGCAGTACATGCATGGTCTCAATTGAAGAAGTGGACTTATGAGGATGATCTTACACTGTTTGATGTCTCCCTAGGATCAAATTTGTGGGACTTTCTTGGTAAAAACCCAGAAAATAACAAGTTGTTCAATGAGTCAATGGCTAGTGATTCTCAAATGATGAACTTGGCATTGAGAGGTTGCAATTGGGTGTTTGAAGGAGTGGAGTCCATTGTGGATGTCGGAGGTGGAACTGGAACCACAGCCAGGGCTATCTGTGATGCATTTCCAAATGTGAAGTGCACTGTGTTTGACCGTCCACAAGTTGTGGAGAACTTATCGGGAACCAACAATTTGAGATATGTTGGTGGTGACATGTTCGAATCTATTCCCAAGGCTGATGCAGTTTTACTCAAGTTGATTTTGCATGATTGGAATGACAATGATGGTAAGAAGATATTAGAAAATTGCAAAGAAGCTATTTCTGATAAAGGCAAAAGAGGAAGAGTAATTTTGATAGAAACTGTGATAAATGAAGGCCAAGATGAGCACGGACTTACTGGACTAAAGCTCGCCATGGATGTGCGAATGACATGTCTTTTAAATGGAAAAGAAAGAAGTGAAGAAGAATGGAAGAAGCTGTTTATGGATGCAGGATTTCAGAGCTACAAAATATATCCTTTGACAGGATATTTGTCTTTGATTGAGATCTATCCTTGA 1077 0.4048 MGSNHGCSANEIFEGQIHLYKHLYAHVLDSMSLKWMIELGIPDIIHNHHQPITLPELASTLQIPLTKVRGVQSLLRYLAHCGFLQIVRIHHHTEEKEAYALTAASQLLLKGSDLSLAPMVELLTKPHAVHAWSQLKKWTYEDDLTLFDVSLGSNLWDFLGKNPENNKLFNESMASDSQMMNLALRGCNWVFEGVESIVDVGGGTGTTARAICDAFPNVKCTVFDRPQVVENLSGTNNLRYVGGDMFESIPKADAVLLKLILHDWNDNDGKKILENCKEAISDKGKRGRVILIETVINEGQDEHGLTGLKLAMDVRMTCLLNGKERSEEEWKKLFMDAGFQSYKIYPLTGYLSLIEIYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00461 358 Gene3D - 2 108 IPR036388 -
Viun5g00461 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Viun5g00461 358 PANTHER O-METHYLTRANSFERASE 15 343 IPR016461 GO:0008168
Viun5g00461 358 CDD AdoMet_MTases 197 296 - -
Viun5g00461 358 Gene3D Vaccinia Virus protein VP39 110 358 IPR029063 -
Viun5g00461 358 FunFam O-methyltransferase ZRP4 110 358 - -
Viun5g00461 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Viun5g00461 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Viun5g00461 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Viun5g00461 358 Pfam O-methyltransferase domain 132 340 IPR001077 GO:0008171
Viun5g00461 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00461 Viun-Chr5 2678818 2680130 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00461 31 356 Monolignol Biosynthesis Gene Families AT5G54160 31.343 1.80e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00461 K22588 - gmx:100811609 516.153