Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00460 ATGCAGCAATCTCACCTTCTACCATACAACCTCCATTCTGTCTTTTGTTCTCACATGACTTTGGCCTACGACTCCATGGAAATCTACGAGCAGTGCTTCATTTCTCCTTCTTCTGCATCTGCAACACACTTCTCTCTCCCATTAACCTTCTTTGATCTTATTTGGCTAAGGTTTCATCCAGTTGAGCGAATCTTCTTCTACCCTCTTCCCCTTCCTCACTCTAACCCTTCTTTTTTCTTTCACAAAGTGCTTCCAAATCTCAAAACTTCACTTTCTAGTACCCTTCAGCACTTCCCACCTTTAGCAGGAAAAATCATTTGGCCTTCTCATTCAGGCAAACCCTTCATCCAATTCAACCCTGGTGATGGCGTGTTATTGGTCCTAGCACAGTGCAACGATGACGCAAAATTCAATCACAGTTTGGACAATTCGCCCCGTGATGCCTCCGAATCGCGCTCTTTGGTACCGCACTTGGAATCATCAGATTCTCATGCCTCAGTTATGTCTTTGCAGATAACTTTTTTTCCAAACAAGGGCTTTTCCATAGGCATCAACTCTCACCATGCTGTTCTTGATGGAAAATCGTCAACCATGTTCATCAAGGCTTGGGCTTATGCATGTAAATCATGCGAAGATGAATCTTTGAACCCGGAGTTAGAGCCTTTATTTGATAGGGATTTGATCAAAGATCCAACTGGTCTTGAAACTGCGATCATCAATACCTGGGCCAAAATGGCATCCCAAATAGACCCTTCTGATACAAGCAACGGGCGAAGCTTAAGGATTATGTCACTACCAACCCAGGAAAACCTAGTTCGAGCCACGTTTGATCTGAAACGAGGAGATTTGGAGAAGATAAAGAAAAGGGTGTTATCGAAGTGGGAGTTAGTGGGGGAAGAAACAGTTTCAGGTTTTTCAAAACCAACCACTTTGTCTACCTTTGTTGCTTGTTGTGCTTATGTGTCTGTCTGCATCGCGAAAGCCACTCATGAAGCTCAAAATGGAGATAAATTTTGTCTAGCGTTCACTGCTGATTGCAGAGCTCGGTTAGAACCTCCAATTCCTGAGAATTACTTTGGAAATTGCGTGGCTTCACATATAGTGGATACAGAGCCACATGACTTTATAAAGGAGGATGGGGTGGTTGTTGTTGCCAAGAGGATTTGGAGTAAAACAAAAATGTTGGAGAAGGTTCTTACTGAAGGAATAGATACAGTGATTCCTAGGTTTGCAGCTATGTTAAGAAAGGGATTTAAGGGAATTGGTGTTTCAGGGTCCAATCGATTTGGTGTTTATGAAACTGATTTTGGTTGGGGAAAGCCAGCGAAGGTGGAAATAACATCCATAGATAGAGGTTTAACCATTGGTTTGGCAGAAACCAAAGAAGAGAAAGGTGGTGTTGAAGTTGGGCTAGCTCTGAACAAACATGTCATGGATCTGTTTCAAGAAATTTTTTATGAAGGGTTATGCATGGACTAA 1479 0.4246 MQQSHLLPYNLHSVFCSHMTLAYDSMEIYEQCFISPSSASATHFSLPLTFFDLIWLRFHPVERIFFYPLPLPHSNPSFFFHKVLPNLKTSLSSTLQHFPPLAGKIIWPSHSGKPFIQFNPGDGVLLVLAQCNDDAKFNHSLDNSPRDASESRSLVPHLESSDSHASVMSLQITFFPNKGFSIGINSHHAVLDGKSSTMFIKAWAYACKSCEDESLNPELEPLFDRDLIKDPTGLETAIINTWAKMASQIDPSDTSNGRSLRIMSLPTQENLVRATFDLKRGDLEKIKKRVLSKWELVGEETVSGFSKPTTLSTFVACCAYVSVCIAKATHEAQNGDKFCLAFTADCRARLEPPIPENYFGNCVASHIVDTEPHDFIKEDGVVVVAKRIWSKTKMLEKVLTEGIDTVIPRFAAMLRKGFKGIGVSGSNRFGVYETDFGWGKPAKVEITSIDRGLTIGLAETKEEKGGVEVGLALNKHVMDLFQEIFYEGLCMD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00460 492 PANTHER - 26 489 - -
Viun5g00460 492 Pfam Transferase family 26 486 - -
Viun5g00460 492 Gene3D - 267 491 IPR023213 -
Viun5g00460 492 Gene3D - 26 255 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00460 Viun-Chr5 2673223 2674904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00460 52 487 Monolignol Biosynthesis Gene Families AT5G48930 25.166 2.25e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00460 - - gmx:100813762 686.797