Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00459 ATGGCTTCCCACAACCTCAAAATCCATGAACAGTGCAATGTTGCTCCTCCCTCTGCACCCCAAACATCCCTCCCTCTCGTATTCTTCGACCTCTTCTGGCTGAGGTTTCACCCTGTGGAACGCATCTTCTTCTATTCCCTCCCTGTAACCCATTCAAACCCATCCATTTTCTTCACCCAAGTTGTTCCAAACCTCAAAACTTCACTCTCTCACACCCTCCAACACTTTTCCCCTCTCGCCGGCAACGTCCTGTGGCCCAATGGTTCTTCCAAACCCGTCGTTCAGTACACCCCAGGCGACGCCGTTTCAGTGGTGCTTGCAGAATCCGAAGCCGATTTCGACCACGCGTTGGACAACACACCCAAAGAAGCGTCAGAGTCACGTTGTTTGGTGCCCCACTTGGAATCCTCTGTTTCTCATGCCTCTGTTATGGCTCTCCAAATCACTCTGTTCCCTAACAGAGGGTTCGCCATAGGAATCAGCACTCACCACGCTGTCCTTGACGGAAAATCTTCAACTCTTTTCATCAAAGCTTGGGCTTCTCTGTGCAAAACCAATGATGATGACTCTGAGTCATCACCATTATCAACACCATCTCTGGCACCAGAATTGGAGCCTTTCTTTGACAGAACAGTCATCAAAAGCCCAAGTGAGTTAGGGTTCAACTTATCAATCGATTTGGCTGAGGTCTTAACCAAATTGTTCCCAAGTGAAAACAGCGACGGAAGATGCCTAAAGCTTCTACCTTTCCCTCCAAGATTAGAGGATCATGTTCGAGGGACATTCGTGCTCACGGGAGCAGATTTAGAGAGATTAAAGAATAGGGTGCTGTCCAAGTGGGACAGTGTAGACATAGTTGAAGCAGAATCAAACTCAAACTCATCGGTTTCTTCAAAACCAACCAAACTATCGACTTTTGTTGTAACTTGCGCTTATACTTTTGTTTGCATTGCGAAGGCCTGGCACGGAGTTGAAAAGGAGAAAAATAAGTTTGCTTGTGGGTTCACTGTGGATTGCAGGGCCAGGTTGGAGCCTCCAATTCCTGAAAACTACTTTGGGAACTGTGTGTGGGGGCATTTGGTGGAATCCAAGCCATCGGCATTTATAGAGGAAGAAGGGTTTGTTATTATTGCCAAAAGTATTCATAGTAAAATAAAACAGATGATAGATGAGGGTGTTTTTCATGGGGTAGGTGATGCGGCTCCTAGATATGCAGCTTTGGCAAAAGAGGGAGTTGAAATCTTAGGAATTGCAGGGTCAAACCGTTTTGGGGTTTATGGGTATGATTTTGGTTGGGGAAAGCCTTCAAAGGTGGAGATAGCATCGGTGGATAGAGCCCTAACAATGGGATTGGCAGAGAAGAGAGATGAGAAAGGTGGTGTTGAAGTTGGGGTTGTTCTGAAGAGACCAGTGATGGAACTATTTGGCTCTTTGTTTCGTAGAGGATTGTCAGATGAGTGA 1461 0.4641 MASHNLKIHEQCNVAPPSAPQTSLPLVFFDLFWLRFHPVERIFFYSLPVTHSNPSIFFTQVVPNLKTSLSHTLQHFSPLAGNVLWPNGSSKPVVQYTPGDAVSVVLAESEADFDHALDNTPKEASESRCLVPHLESSVSHASVMALQITLFPNRGFAIGISTHHAVLDGKSSTLFIKAWASLCKTNDDDSESSPLSTPSLAPELEPFFDRTVIKSPSELGFNLSIDLAEVLTKLFPSENSDGRCLKLLPFPPRLEDHVRGTFVLTGADLERLKNRVLSKWDSVDIVEAESNSNSSVSSKPTKLSTFVVTCAYTFVCIAKAWHGVEKEKNKFACGFTVDCRARLEPPIPENYFGNCVWGHLVESKPSAFIEEEGFVIIAKSIHSKIKQMIDEGVFHGVGDAAPRYAALAKEGVEILGIAGSNRFGVYGYDFGWGKPSKVEIASVDRALTMGLAEKRDEKGGVEVGVVLKRPVMELFGSLFRRGLSDE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00459 486 Gene3D - 6 232 IPR023213 -
Viun5g00459 486 SUPERFAMILY CoA-dependent acyltransferases 298 443 - -
Viun5g00459 486 Gene3D - 253 485 IPR023213 -
Viun5g00459 486 PANTHER - 6 485 - -
Viun5g00459 486 Pfam Transferase family 273 476 - -
Viun5g00459 486 Pfam Transferase family 19 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00459 Viun-Chr5 2665377 2667132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00459 6 475 Monolignol Biosynthesis Gene Families AT5G48930 25.102 2.45e-16 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00459 - - gmx:100814826 713.375