Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00457 ATGGCTTCCCAAAACCTCAAAATCCATGAACAGTGCAGTGTTGCTCCACCCTCTGCACCCCAAACATCCCTCCCTCTCGTATTCTTCGACCTCTTCTGGCTGAGGTTTCACCCTGTGGAACGCATCTTCTTCTATTCCCTCCCTGTAACCCATTCAAACCCATCCATTTTCTACACCCAAGTTGTTCCAAACCTCAAAACTTCACTCTCTCACACCCTCCATCACTTTTCTCCTCTCGCCGGCAACGTCCTGTGGCCCAATGGTTCTTCCAAACCCGTCGTTCAGTACACCCCAGGCGACGCCGTTTCAGTGGTGCTTGCAGAATCCGAAGCCGATTTTGACCACGCGTTGGACAACACACCCAAAGAAGCGTCAGAGTTACGTTGTTTGGTGCCTCACTTGGAATCCTCAGATTCTCATGCCTCTGTTATGGCTCTCCAAATCACTCTGTTCCCTAACAGAGGGTTCGCCATAGGAATCAGCACTCACCACGCCGTCCTTGACGGAAAATCTTCAACTCTTTTCGTCAAAGCTTGGGCTTCTCTGTGTAAAACCAGTGATGATGACTCTGAGTCATCACCATCATCGTTACCATCTTTGGCTCCAGAATTGGAGCCTTTGTTTGACAGAACAGTCATAAAAAGCCCGAGTGAGTTAGGGTTCAACGCATCATTCGATTTAACTAAGCTCGTAATCAATTCGTTCCCAGGTGAAAATAGGGAAGAAAGATGCTTGAAGCTTCTACCTTTCCCTCCAAGATTGGAGGATCAGGTCCGAGGGACATTCGTCCTCACGGTAGCAGATTTGGAGAGATTAAAGAATTGGGTGCTGTCCAAGTGGGACAGTGTAGACATAGTTGAAGCAGAACCAAACTCAAACTCAACGGTTTCTTCAAAACCAACCAAACTGTCGACTTTTGTTGTAACCTGCGCTTATGCTGTGGTTTGCATTGCGAAGGCCTGGCACGGAGTTGAAAAGGAGAAAAATAGGTTTGCTGGTGGGTTCAGTGTGGATTGCAGGGCCAGGTTGGAGCCTCCAATTCCTGAAAACTATTTTGGGAACTGTGTGTGGGGGAATTTCTTGGATGCTAAACCGTCAGCATTTATAAAGGAAGAAGGGTTTGTTATTATTGCCAAAAGTATTCATAGTAAAATAAAAGAGATGTTAGATAAGGGTGTTTTTCATGACGCAGATACTTTTGCTGCTAGATTTGCAGCTTCCGCAAAAGAGGGAATTGAAATCATAGGAATTGCAGGGTCAAACCGTTTTGGGGTTTATGGGAATGATTTTGGTTGGGGAAAGCCTTCAAAGGTGGAGATTGCATCGATTGATAGAGCCCTAACAATTGGATTGGCAGAGAAGAGAGATGAGAAAGGTGGTGTTGAAGTTGGCGTTGTTCTGAAGAGATCTGTGATGGATCTATTTGCCACTTTGTTTCGTGGAGGATTAACAGATGAGTGA 1461 0.4593 MASQNLKIHEQCSVAPPSAPQTSLPLVFFDLFWLRFHPVERIFFYSLPVTHSNPSIFYTQVVPNLKTSLSHTLHHFSPLAGNVLWPNGSSKPVVQYTPGDAVSVVLAESEADFDHALDNTPKEASELRCLVPHLESSDSHASVMALQITLFPNRGFAIGISTHHAVLDGKSSTLFVKAWASLCKTSDDDSESSPSSLPSLAPELEPLFDRTVIKSPSELGFNASFDLTKLVINSFPGENREERCLKLLPFPPRLEDQVRGTFVLTVADLERLKNWVLSKWDSVDIVEAEPNSNSTVSSKPTKLSTFVVTCAYAVVCIAKAWHGVEKEKNRFAGGFSVDCRARLEPPIPENYFGNCVWGNFLDAKPSAFIKEEGFVIIAKSIHSKIKEMLDKGVFHDADTFAARFAASAKEGIEIIGIAGSNRFGVYGNDFGWGKPSKVEIASIDRALTIGLAEKRDEKGGVEVGVVLKRSVMDLFATLFRGGLTDE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00457 486 PANTHER - 6 484 - -
Viun5g00457 486 Gene3D - 254 484 IPR023213 -
Viun5g00457 486 Pfam Transferase family 19 476 - -
Viun5g00457 486 SUPERFAMILY CoA-dependent acyltransferases 298 452 - -
Viun5g00457 486 Gene3D - 6 231 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00457 Viun-Chr5 2642190 2643995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00457 4 475 Monolignol Biosynthesis Gene Families AT5G48930 23.868 2.22e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00457 - - gmx:100815354 669.077