Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00455 ATGAAAGTGGTAGAAGTTGAGAGTATAGCACCAAGCTCTGAATCCAAAGAGTTACCGACAGAGGCATCTTTCGCCCTCACCTTCTTCGACATATTATGGCTAAGGTTACCCCCTGTTCAACGTGTCTTCTTCTATGAATTTCATCATCCAAGTGATGTTTTTTTCGATACCCTTCTTCCCAAACTCAAACGCTCTCTCTCTCTTGCACTTGGCCACTTTTACCCTCTCGCTGGACACCTCACTTGGCCCACTCACTCCACCAAACCCCTCATCGTTTACAACCAGGGTGATACTCTTTCACTCACTGTAGCTGAATCTGACGCCGATTTCAACCATCTTGCAGGGACAAATTTCACCGAAGCTACAGAAACTCACCCTTTTGTACCTCCCTTGACCATATCCCACGAACAAACCACGCTTTTTGCCGTGCAAGTTACTCTCTTTCCAAACGCTGGATTTGCCATCGGAATAACCTCCCACCATGCTGTTCTTGATGGCAAGGCTTCAACAACATTTGTCAAATCGTGGGCGTATCTCTGCAGAGAAGCACAACCACCCTATTCTCTGCCAGCGGAATGGGTTCCTTTCTTTGACAGGGAAATAGTGAAAGACCCCACAAAAATAGGAGAAAAGTATTCCCGTGATTGGTTAAAGATGGGTGGACCCAACAACAGAAGCCTCAAGGTTAGCGAGATGCCAGTTCCGGAAGAAGCAACTAGAGGCTTGTTTCATTTGTCTAGCTCCGGTATCGAAAAGCTGAAGCAGATTGTGCAGAGTAAAGAGAACAACACCAACCTTCACTTGTCAACTTTTGTTCTAGCTGCAGCCTATTCGATGGTGTGCAGAGTGAAAGCAGAAGGTGGCCAAAGTACAAGCACTGGTTTCGGTCTGAACGTTGATTGCAGGCGTCAGATGGAACCGCCTGTTCCCCCGACGTATTTAGGGAACTGTGTTGGTATCACTGTTGCAATTACTGAAACAAAAGACTTGTTGGGGGAGGATGGGCTTGTTGTGGCTGTGAAAGCACTGAGTGAAGCTTTGGGAACATTGAAGAAGGAGGGTTTTCTGCACGAAGCAGAAGACTGGTGGAAGATGGTGTATGAAAGTTACAAAGTTGGTGACACAAAGACAGCTGCATTTGCAGGGTCACCGAGGTTTGACATTTACAGTAGTGATTTTGGTTGGGGGAAACCAACGAAGGTGGAGATGGTGTCTATTGACAGAACTGCAGCGTTTTGTTTTTCAGATAGCAGAACTGGTGATGGTATTGAAATAGGTTTCGTGACCAAGAAAAAAGCTATGGAGACCTTTGCTTCTCTCTTTGAAGAGGGTCTTCGATCTTGA 1344 0.4613 MKVVEVESIAPSSESKELPTEASFALTFFDILWLRLPPVQRVFFYEFHHPSDVFFDTLLPKLKRSLSLALGHFYPLAGHLTWPTHSTKPLIVYNQGDTLSLTVAESDADFNHLAGTNFTEATETHPFVPPLTISHEQTTLFAVQVTLFPNAGFAIGITSHHAVLDGKASTTFVKSWAYLCREAQPPYSLPAEWVPFFDREIVKDPTKIGEKYSRDWLKMGGPNNRSLKVSEMPVPEEATRGLFHLSSSGIEKLKQIVQSKENNTNLHLSTFVLAAAYSMVCRVKAEGGQSTSTGFGLNVDCRRQMEPPVPPTYLGNCVGITVAITETKDLLGEDGLVVAVKALSEALGTLKKEGFLHEAEDWWKMVYESYKVGDTKTAAFAGSPRFDIYSSDFGWGKPTKVEMVSIDRTAAFCFSDSRTGDGIEIGFVTKKKAMETFASLFEEGLRS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00455 447 Gene3D - 1 227 IPR023213 -
Viun5g00455 447 PANTHER - 2 446 - -
Viun5g00455 447 SUPERFAMILY CoA-dependent acyltransferases 242 446 - -
Viun5g00455 447 Gene3D - 234 447 IPR023213 -
Viun5g00455 447 Pfam Transferase family 5 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00455 Viun-Chr5 2607496 2609483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00455 42 442 Monolignol Biosynthesis Gene Families AT5G48930 24.286 3.64e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00455 - - gmx:100805184 619.772