Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00454 ATGGTCTGTGTTCTTGTGAGGAGAATTCATCAGAGAAGATTAATAATAGCTAATAGCTTAGAATCAACACATTTGAAATGTATAAGATTACAGGGCACGTTATGCAGAGAATATAATGTATATCTGTTTCAATTAACCACCTGCATCAGTTTTCTTTTCTCTTTTCCTTTTTTTCTGTTTGGTCCAAGCAACAAGAAAGAAACCATGCATGTGGTACAAGTTTTCAGCATAGCACCAACTTTGGATTCAGAAGAATTACCAACACAAACATCGCTTCCTCTCACCTTCTTTGACATACTATGGTTAAGGTCACCTCCTATTCAACGCATTCTCTTCTACCAATTCTCTCACCCAACCCCACCCTTCTTCCATACCCTTCTTCCCAAACTCATAAACTCTCTTTCTCTTGCACTAGGCCACTTTTTTCCTCTTGCAGGCCACCTCACTTGGCCCCTTCACTCCCAAAACCCCATCATCAATTACAAAACGGGTGACACCGTTTCTCTCACAGCAGCTGAATCTGATGCTGATTTCAACCATCTAGCGGGCTCAAATCTTTGGGAAAGTGAAAAAATGCACCATCTTTTACCTCACTTGACAATATCACACGAACAAGCTACGATTTTAGCCTTGCAAATCACTCTGTTTCCAAACTCCGGATTTTCCATTGGAATAACCTCACACCGTGCTGTTCTTGATGCCAAGACTTCAACATCGTTTATCAAGTCCTGGGCTTATCTTTGTCGAGAATCACGCGCAGCCACTTGTTTGCCACCTGAATTGTGTCCTTTCTATGAAAGGATACTAGTAAAAGACCCCAACCAAATAGGGGAAAAATTCGTCAATGATTGGTTAATGCAGGGAGGATCCAACAACAGAAGCCTGATGGTTTGGGATGTGCAATCTCCGGAACATGCAACTGGAGGATTATTTCAATTGTCTGGTTTAGATATTGAAAAGCTGAAGAATTGTGTCGTGTCTAAGCAGGGACAGAACAACAACATCAATCTTCACTTGTCAACGTTTGTGTTGTCTCTTGCATATGCATGGGTTTGCAGGGTGAGAGCCGAGGAAATGGAAAACGAGAGAGTTATGTTGATTCTGACAGTGGATTGCAGGGGTTGTTTGGAGCCACCTCTTCCTCCGACCTATTTTGGTAACTGTGTTGGGTTAAGACTTGCAACTGCTGAAAGAAGAGAATTGTTGGGGGAGGATGGACTATTTGTGGCTGTGGAAGCACTAAGTGAAGCTTTGGAAAGTGTGAAGAAGGATGGTGTTCTGAATGGAGCTGAAAATTGGTCATCATGGTTGCTTGAAGCTGATGTGAAGGCGATTGGAGTTGCAGGGTTACCGAATCTTGAGGCTTATAGTTGTGACTTTGGTTGGGGAGGACCAAAGAAGGTGGAGACAGTGTCTGTTGAAAGAACTACAGTGTTTAGTCTTTCAGATAGCAACAGTGGAGAAGGAATTGAGATAGGTTTTGTGTCCAAGAAAACAACAATGGAGAACTTTGCTTCTCTCTTTGCTAAAGGACTTCAATCTTGA 1545 0.4227 MVCVLVRRIHQRRLIIANSLESTHLKCIRLQGTLCREYNVYLFQLTTCISFLFSFPFFLFGPSNKKETMHVVQVFSIAPTLDSEELPTQTSLPLTFFDILWLRSPPIQRILFYQFSHPTPPFFHTLLPKLINSLSLALGHFFPLAGHLTWPLHSQNPIINYKTGDTVSLTAAESDADFNHLAGSNLWESEKMHHLLPHLTISHEQATILALQITLFPNSGFSIGITSHRAVLDAKTSTSFIKSWAYLCRESRAATCLPPELCPFYERILVKDPNQIGEKFVNDWLMQGGSNNRSLMVWDVQSPEHATGGLFQLSGLDIEKLKNCVVSKQGQNNNINLHLSTFVLSLAYAWVCRVRAEEMENERVMLILTVDCRGCLEPPLPPTYFGNCVGLRLATAERRELLGEDGLFVAVEALSEALESVKKDGVLNGAENWSSWLLEADVKAIGVAGLPNLEAYSCDFGWGGPKKVETVSVERTTVFSLSDSNSGEGIEIGFVSKKTTMENFASLFAKGLQS 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00454 514 SUPERFAMILY CoA-dependent acyltransferases 338 428 - -
Viun5g00454 514 Pfam Transferase family 83 506 - -
Viun5g00454 514 Gene3D - 303 514 IPR023213 -
Viun5g00454 514 Gene3D - 69 295 IPR023213 -
Viun5g00454 514 PANTHER - 70 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00454 Viun-Chr5 2604427 2606618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00454 133 465 Monolignol Biosynthesis Gene Families AT5G48930 24.294 1.10e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00454 - - vun:114186114 1031.94