Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00447 ATGTCTGGACAGTCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTCAGCTCTTTGACCGCCACCGTTTCCTCACCGGCCAACGCTCCGGCACCTGCATTCAGCACAGGCCAACTTCAGGTGCAAGCAGTTATGAAATTAAAGAGCTCAATGGTACAATGCTGAAGAAAACTAAGGCAAAGAATCTGAAGGATGCTAGAGAAAAGCAACAATTCTCCACAGAATCATCCATAACTTCTTTGTCTTCATCCTCTTGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACCATTCAGATGCAATCATCATCAAGAAATCAGACAAGAATTCCTGAACATACAAATTCAAAAGTAGCAAAGAAGCAACTTGATACCTCACGCCATGAATCCCTCCATTTCAACCATATTGTCAAAGACTCAATGCATAAAGAAGCTCAAGGATTGTCTGTGAGAACTGTGGCTGAAGAGGAAAAGAAGGGTCACACTAATACCTTGAAACTCATAGACTCTCCCCGGCCTCTGCGGTCACAAAAATCTGTCAATGTAGGAGTTACAGTTGCCGGCGAACAATTCCACACTCTTGCCAAGTCCAAGAAAACACCTTGGGACTCACCAAGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAAGCATAAGGAATTCCCAAGGCTTTCCTTGGACAGCAGAGAAGGGTCCAATAGAGGTTCCAATGAAGGAAACAAGTCTCGCAACCTGTTGAAGGGTCAGCAGAAAGGTTATGCAAAGAGTTCTAGCACAATGATTAACCAGCTGCAAGAACCAGAAACTTCCAAAAGATCTTCCAGTGTTGTAGCAAAGTTGATGGGACTTGAAGCCCTCCCGGAGCGTGCACAAACTTGTGGGAGTCCAATTGGAACTTCTAGGTTCTCTAGCACATGTGATGAAGATATGCACCACCAAAAATTCACCTTGCCTCAATTTAGAAAGGCTGATTCAATCACAAATGAGAAGCCTTATTCACGATTTGCACTAGAATCAACTCCTTGGAGGCAACCTGATGCAATCCAAAGTTCTCAATTACAAACTTCCAAGGGTTGTGAATCTGATGTAAAAGCCTCAAAGACCTCTCTCACGGTATATGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACACATTCTTGAAGCAATGCAGAGACGTAAAGATTCGTTAGACATTGCTAGAGATCAGGCTTCAAATTCTCCATCTGACAATAAGAATAGTACTAATACCAGTGAAAGCTCGAACTTACAAAGCCCACGAGTACGACAGAAAGATCTTGTATCTGTCACGGTTGAGATGTCAAATTCTAACCGTGGTAGTAAACTGCCAATTGTCATCATGAAACCTGCGAAAGTTGCTAGAAAAGTCAATAGTCCTTCTCCTACAGAACTATCAGTTCATGGAAAATCTGGTGTCAACAAGTGTTCTTCTAGCAATCCAACAAATGGAAGATTGGTTGACAAGAATAGTGCTAAAGGCATAAGTTCAACAAAAAATATCAAGGATCCTTTGGGCCAACAGGTTCGTCCATCATATAAAAACTTGAGAACTTCAAAATTGATGCAATCCTTGGAAGTTTCTCAAGACAAGACTGGAGAATGCACCACCAGTTCTGGTTATATAACTGTGTCTGGGAGCCCCAGATTACAAAAGAAGTTTGGTCTGGAGAGGTGTTCACGACCAACCAGTTCATCATCGGATTCCTGCATTAACAGAAGAGAGCACAATACTCAACCTGTGGAATTGTCTTCTCCAAGTACAACACCAAGACATAAGTTCTCCAGTTTGCAGCAAATAAATGAACGTTTCAGTGAGATCAGTAGTAACTGGAGGAATTTAAAGCACCATGTTAATGTCATTTCGGACTTAGACGACAAAAGAAACTCAACCGGTCATAGTGAGATTGAAGTCATTCGAATTGATCAAACTGGAAAGATCATTAGCTCCTCCATCCAGCTGAGTTGCATGCATCAAAATAATGCATTTGAAGAGTTGAGGAAGGCTGAGACAATGGTTACTGCGGAACAACCAAGTCCTGTGTCTGTTCTTGATGCTGCATTCTATAGAGATGACCCACCATCTCCTGTGAAAAAGAAACCAGACATCTCAAAATACTCAGTAGGTGAAGCTCAAAGCACTGATGGCGACAGTGAAGAGAACTCAGTGGATATACTTCAAGAAATTGACTTCTTTGAAGAGAAATTCATCAATTTCAATAACACTAAGCACCCTGACCATAAGTATATAACAGAAATACTGATAGCATCAGGTCTGCTGAGTGGCCACAGCTCCAGCCAGATATTTCACTCGCCGGGTCACTTGATTAATCCAAAGTTGTTCTTTGCACTTGAACAAGAGAAGACAAAGAAAAGACATTTTAACATTGAAGACAGTGCCAGGTTAAAAAATCCTGAGCAGATACAAAGAAAACTCATATTTGATGTTGTCAATGACATTTTAGTTCAAAAGCTGATATTGGATAGTTCTTCTGCATTATTGTGGTGCCAACCAAGTGAGTTTGCAAGCACAAGAACAAAAGGGCAGAAGCTATTGGATGAACTGTGCACAGAAATAGATCAGTTGCAGCCTCAATATGGGAATGTCGGTTTAGCTCATGAGGATGAGAATTTGAAGCATCACCATGCAATTTGGACCAACTGTTGCACTGAGACACCAAATGTTGTGTTGGATATTGAACGTTTGATCTTTAAGGATTTGATAACCGAGGTTGTGAGAGGTGAAGTAGCAAACCACACTGGTACACATTGCAGGCAACTAGTGTTTTTCAAGTAG 2889 0.4136 MSGQSLKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSGTCIQHRPTSGASSYEIKELNGTMLKKTKAKNLKDAREKQQFSTESSITSLSSSSCSSSMSSLEFNRTIQMQSSSRNQTRIPEHTNSKVAKKQLDTSRHESLHFNHIVKDSMHKEAQGLSVRTVAEEEKKGHTNTLKLIDSPRPLRSQKSVNVGVTVAGEQFHTLAKSKKTPWDSPRLSYDETFKSATKHKEFPRLSLDSREGSNRGSNEGNKSRNLLKGQQKGYAKSSSTMINQLQEPETSKRSSSVVAKLMGLEALPERAQTCGSPIGTSRFSSTCDEDMHHQKFTLPQFRKADSITNEKPYSRFALESTPWRQPDAIQSSQLQTSKGCESDVKASKTSLTVYGEIEKRVAELEFKKSGKDLRALKHILEAMQRRKDSLDIARDQASNSPSDNKNSTNTSESSNLQSPRVRQKDLVSVTVEMSNSNRGSKLPIVIMKPAKVARKVNSPSPTELSVHGKSGVNKCSSSNPTNGRLVDKNSAKGISSTKNIKDPLGQQVRPSYKNLRTSKLMQSLEVSQDKTGECTTSSGYITVSGSPRLQKKFGLERCSRPTSSSSDSCINRREHNTQPVELSSPSTTPRHKFSSLQQINERFSEISSNWRNLKHHVNVISDLDDKRNSTGHSEIEVIRIDQTGKIISSSIQLSCMHQNNAFEELRKAETMVTAEQPSPVSVLDAAFYRDDPPSPVKKKPDISKYSVGEAQSTDGDSEENSVDILQEIDFFEEKFINFNNTKHPDHKYITEILIASGLLSGHSSSQIFHSPGHLINPKLFFALEQEKTKKRHFNIEDSARLKNPEQIQRKLIFDVVNDILVQKLILDSSSALLWCQPSEFASTRTKGQKLLDELCTEIDQLQPQYGNVGLAHEDENLKHHHAIWTNCCTETPNVVLDIERLIFKDLITEVVRGEVANHTGTHCRQLVFFK 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00447 962 MobiDBLite consensus disorder prediction 589 623 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 490 537 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 242 288 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 488 537 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 83 99 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 426 455 - -
Viun5g00447 962 Pfam Domain of unknown function (DUF4378) 777 941 IPR025486 -
Viun5g00447 962 MobiDBLite consensus disorder prediction 588 623 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 113 137 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 723 751 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 232 288 - -
Viun5g00447 962 MobiDBLite consensus disorder prediction 71 99 - -
Viun5g00447 962 PANTHER LONGIFOLIA PROTEIN 1 958 IPR033334 GO:0051513
Viun5g00447 962 Coils Coil 412 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00447 Viun-Chr5 2580672 2586053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00447 140 961 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.579 5.16e-85 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00447 - - vun:114182931 1845.48