Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00438 ATGGGTAACATCTGCGCTCGCTTGAAGGCGAAGCCCGCGCCGCCGCACTCCACCGCCGCGAAAAAACGCTCCTCTTCCCGCAGAGAGAGGAAGCTCGACGACGCTGCGATTCGCGAGCAGGCCATCGCCGCCGCGATTCTCTTCAAGCAGCATCAGCAGCAGCAGCAGAACTTCGATCGCTCCACTTCGCTTAGGTACCCGAATGGGGTCTCCAAGAAGAGCAGCAGCAGCAGCAACACCTTGCCGAGGAGTTCGAGTTCCAGGGCCAGGTCCCTCACCGACCCTCTCCTTCAACCTCATCAGCTTCTCAACCAGGACGTGAAAGTCGATGATCTTGAGACAAATCATATTGTCCTTGTTCATGGAGGTGGCTTTGGGGCCTGGTGTTGGTATAAATCCATTGCACTTCTAGAAGAAAGTGGTTATAAAGTAGCTGCAATAGATTTAACTGGTTCTGGAGTGAGTTCATTTGATACAAACAGCATTACAAGTTTGTCACAATATGTGAAGCCACTCACTGACTTCCTTGAAAAACTTCCAGAAGGCAAAAAGGTGATTTTGGTTGGGCATGATTTTGGAGGGGCATGTATATCATATGCAATGGAGATGTTTCCTCTTAAGATTTCCAAAGCTGTGTTTATTGCTGCAGCAATGTTGACGAATGGACAAAGCACTCTCGATATTATTTCTCAACAGGCAGGTTCAGATGATCTTATGCAACAGGCTCAGGTTTTTATATATGCTAACGGGAATGATCTTCCTCCCACTTCTTTTGATCTGGACAAGTCTTTGTTGAAGGATTTGTTATTCAACCAAAGTCCCTCCAAAGATGTTGCATTGGCATCTGTCTCCATGAGGTCTGTACCATTTGCACCAGTTTTAGAGAAGGTTTCCCTTTCAGACCTGAAATATGGATCTGTAAGGCGGTTTTATATACAAACTCTTGAAGACAATGCCATACCCATTTCACTCCAGGAGAACATGATAAATGCAAACCCCCCAGAAAAGGTTTTCCGTTTGAAGGGGGCTGATCATTCTCCTTTTTTCTCAAAGCCTCAAGCTCTGCATAAGTTGTTGGTAGAAATCTCAAAGATCCTCTGA 1101 0.4632 MGNICARLKAKPAPPHSTAAKKRSSSRRERKLDDAAIREQAIAAAILFKQHQQQQQNFDRSTSLRYPNGVSKKSSSSSNTLPRSSSSRARSLTDPLLQPHQLLNQDVKVDDLETNHIVLVHGGGFGAWCWYKSIALLEESGYKVAAIDLTGSGVSSFDTNSITSLSQYVKPLTDFLEKLPEGKKVILVGHDFGGACISYAMEMFPLKISKAVFIAAAMLTNGQSTLDIISQQAGSDDLMQQAQVFIYANGNDLPPTSFDLDKSLLKDLLFNQSPSKDVALASVSMRSVPFAPVLEKVSLSDLKYGSVRRFYIQTLEDNAIPISLQENMINANPPEKVFRLKGADHSPFFSKPQALHKLLVEISKIL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00438 366 Gene3D alpha/beta hydrolase 108 364 IPR029058 -
Viun5g00438 366 PRINTS Epoxide hydrolase signature 340 362 IPR000639 GO:0003824
Viun5g00438 366 PRINTS Epoxide hydrolase signature 121 139 IPR000639 GO:0003824
Viun5g00438 366 PRINTS Epoxide hydrolase signature 141 156 IPR000639 GO:0003824
Viun5g00438 366 PRINTS Epoxide hydrolase signature 187 200 IPR000639 GO:0003824
Viun5g00438 366 PANTHER METHYLESTERASE FAMILY MEMBER 114 363 IPR045889 -
Viun5g00438 366 Pfam alpha/beta hydrolase fold 115 352 IPR000073 -
Viun5g00438 366 SUPERFAMILY alpha/beta-Hydrolases 115 361 IPR029058 -
Viun5g00438 366 MobiDBLite consensus disorder prediction 1 32 - -
Viun5g00438 366 FunFam putative methylesterase 11, chloroplastic 111 365 - -
Viun5g00438 366 MobiDBLite consensus disorder prediction 57 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00438 Viun-Chr5 2524970 2530224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00438 29 188 Miscellaneous Gene Families AT3G29770 63.804 5.67e-59 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00438 - - gmx:100818550 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00438 5 2524970 2530224 Viun5g00438 5 2524970 2530224 ECH