Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00423 ATGGGTTTCTCTCTGTTACCAAAAGCAACTCCTTGCATATTGCTCTTGGTTCTGCTGTATTGCACTTCCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACAATCAAATGGGACATTATAAGTTGGACCCCTGATGGATACGTAGCTGTTGTTACAATGAACAATTTCCAACAATATCGTCATATTGCTTCACCTGGCTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGTGATTGTTCAAAATTTAAGGGAGGTATTCCACATTGCTGTAAGAAAGATCCGACGGTTGTGGATTTGCTTCCTGGAACACCATACAATCAACAAATTGCAAATTGCTGCAAAGGTGGGGTGCTTAGTTCTTGGGTGCAGGATCCTACCAATGCAGTTTCATCATTTCAAGTTAGTGTTGGTAGAGCTGGAACCACAAACAAAACTGTCAAAGTCCCGAAAAACTTTACCCTGAATGCACCAGGACCAGGTTATACTTGTGGTCCAGCCAAGATTGTGAAACCCACCCAATTCATTCAAGCAGATAAAAGGAGAGTGACCCAAGCACTGATGACATGGAATGTGACATGCACATACTCACAATTTCTAGCTCAGAAAACTCCCTCTTGCTGTGTCTCACTTTCATCTTTCTATAATGATACTATTGTGCCGTGCCCAACATGTGCATGTGGTTGCCAGGGTAACTCATCTCTGTCAGGAAGCTGTGTGAATCCAAATACCCCACATTTGGCATCGGTTGTTTCTGGCTCTGGGAAGAATAACTTTTCACCTTTGGTTCAGTGTACTAGTCATATGTGTCCCGTCCGAATCCACTGGCATGTTAAGCTAAACTACAAGGAGTACTGGCGTGTAAAGGTTACTATTACTAATTTTAATTACAGGATGAACTATTCCGAGTGGAACATGGTTGTTCAACATCCAAACTTTGACAATTTGACTCAACTATTCAGTTTCAACTACAAGTCATTGACCCCTTACGGTTCAATAAATGATACAGCAATGCTATGGGGAGTTAAGTTCTATAACGATTTTCTCAACCAAGCTGGTCCTAATGGCAATGTTCAATCCGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGATGGGCTTTTCCTCGAAGGATCTACTTCAACGGTGACAACTGTGTCATGCCACCACCTGATGCTTATCCCTGGTTACCTAATGCTGGTTCTCGGCCAGAGGTTTCTTTGTTTGCCGTAGTGATAGCTTCTTTGGTAGCCTTGGTATTTTATGCCCATGCATAA 1347 0.4261 MGFSLLPKATPCILLLVLLYCTSFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPTNAVSSFQVSVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPAKIVKPTQFIQADKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVPCPTCACGCQGNSSLSGSCVNPNTPHLASVVSGSGKNNFSPLVQCTSHMCPVRIHWHVKLNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRPEVSLFAVVIASLVALVFYAHA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00423 448 PANTHER PROTEIN COBRA 18 437 IPR006918 GO:0010215|GO:0016020
Viun5g00423 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0016020
Viun5g00423 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00423 Viun-Chr5 2416014 2419655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00423 13 443 COBRA Gene Family AT3G02210 75.751 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00423 - - gmx:100783820 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00423 5 2416014 2419655 Viun4g00837 4 6754940 6757548 PCT