Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00422 ATGAGGCTTTTCATATCAGCTGCATGTGTTCTTGTGCTATTCTCTTGTACAGCTGCGTATGATCCTTTGGATCCAAATGGAAACGTAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTAGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCGGGGTGGACCTTGTCGTGGTCATGGGCAAAGAAGGAAGTAATATGGTCCATGGTAGGAGCTCAAACAACAGAGCAAGGAGACTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAATCAACAGTTCTCAAACTGTTGCAAGGGTGGAGTGGTTGCAGCATGGGGCCAAGACCCTTCAGCAGCAGTTTCATCCTTCCAAGTCAGTGTTGGGTTAGCCGGCACTTCAAACAAGACTGTTAAACTTCCCAAGAACTTCACTCTCTTGGGTCCAGGACCAGGCTACACTTGTGGTCCTGCAAAGGTTGTTCCTTCCACCGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTAATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCAAGAAAGAACCCAGGTTGCTGTGTATCTTTGTCATCCTTTTACAACGAGACCATTACCCCTTGTCCCTCTTGTGCATGTGGATGCCAGAACAAGAGGAACTGTGTCAAGAGTGACTCTAAACGTATCAACATGGTGGGGATTCACACTCCAAAGAAAGACAATGAACCATTGCTTCAGTGCACTCATCATATGTGCCCAATAAGAGTGCACTGGCACGTGAAGCTCAACTACAAGGACTATTGGCGAGTCAAGGTTGCCGTAACAAATTTCAACTACAGGATGAACTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTCTACTTCCATACGAGTCCATAAATGATACTGGCATGTTCTATGGAATGAAATACTTTAACGATCTATTGATGGAAGCTGGACCGACTGGGAATGTTCAATCAGAAATTCTTCTTCAGAAAGATAAGGATACATTCACACTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAATGGCGAAGAATGCATGCTGCCACCGCCGGATACCTATCCGATCCTCCCTAACTCTGCCCCTGTGAACCTATTGAAATTCCCAGAATTCATTTTCACAATGCTTGTCATGCTAGCTGTTTGGTGA 1296 0.4529 MRLFISAACVLVLFSCTAAYDPLDPNGNVTIKWDVVSWTPDGYVAVVTMSNFQMFRHIMNPGWTLSWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSAAVSSFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPSCACGCQNKRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKVAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNVQSEILLQKDKDTFTLKQGWAFPRKVYFNGEECMLPPPDTYPILPNSAPVNLLKFPEFIFTMLVMLAVW 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00422 431 PANTHER PROTEIN COBRA 8 423 IPR006918 GO:0010215|GO:0016020
Viun5g00422 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Viun5g00422 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
Viun5g00422 431 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00422 Viun-Chr5 2413546 2416043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00422 1 430 COBRA Gene Family AT3G29810 63.554 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00422 - - gmx:100783410 887.1