Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00397 ATGTTTCTGAAATGTTTTGGTTACTCAAGTTCATCTGGGAGACCATATCCAACAGTAATAGAAGAGTTGTGTCGTCATTTTTCTCTTGCTGATATTCGGAAATCAACCAACAATTTCGATGAAAACAGAGTAATTGGAGAAGGAGCAGTTGGTAGAGTATACAGAGGTTGTCTCCAACATAATGATGGATCTGATTACGCAGTCGCAGTGAAGCGATTTAAGGCGCAATACAGTGAGGAGTTCAAAAGAGAAGTAGAGTTACTGTGTCAACTTCATCACCCTAATTGTGTGTCTATTGTAGGGTTTTGCAACTGCGAAACAGAGAATATGATTGTGTATGAGTACATGTCCAATGGATCTCTACATAGGAACAGCGCGTGGACTACACTACCTTCATGCAGGACTGAAGCGCACCATCATTCACCGCAACATCAAATCTAG 441 0.4104 MFLKCFGYSSSSGRPYPTVIEELCRHFSLADIRKSTNNFDENRVIGEGAVGRVYRGCLQHNDGSDYAVAVKRFKAQYSEEFKREVELLCQLHHPNCVSIVGFCNCETENMIVYEYMSNGSLHRNSAWTTLPSCRTEAHHHSPQHQI 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00397 146 PANTHER OS01G0750732 PROTEIN 12 124 - -
Viun5g00397 146 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
Viun5g00397 146 Gene3D Phosphorylase Kinase; domain 1 9 115 - -
Viun5g00397 146 ProSiteProfiles Protein kinase domain profile. 39 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00397 146 SUPERFAMILY Protein kinase-like (PK-like) 12 123 IPR011009 -
Viun5g00397 146 Pfam Protein tyrosine and serine/threonine kinase 42 122 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00397 Viun-Chr5 2297523 2298140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00397 9 132 Receptor kinase-like Gene Family AT3G51550 39.370 2.58e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Viun5g00397 PK_Tyr_Ser-Thr 7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00397 - - vun:114185221 313.538