Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00395 ATGTTTCTAAAATGTTTTGGTGAGTCAAGTTCATCGGGGAGACAATATCCAACAGTAATAGAAGAGTTGTGCCGTCATTTTTCTCTTGCTGATATTCAGAAATCAACCAACAATTTTGATGATAACAGAGTAATTAGAGATGGAGCATGTGGTAAGGTATTCAAAGGTTGTCTCCGACATAACGATGGTTCTTATTACGCAGTCGCAGTGAAGCGATTTCACGTGCAAGGCAGTGAAGGGTTTAAAAGAGAAGTAGAATTACTGTGTCAGCTTCATCACCCTAATTGTGTGTCTATTGTAGGATTTTGCAAGCACAAAACAGAGAGTATTGTTGTGTACGAGTACATGTCCAATGGATCTCTGGATCAACACCTGGGAAGTGATGTTAGAGAAGCACTGCCATGGAAAAAAAGGTTAGAGATTTGCGTAGGAGCAGCGCGTGGACTACACCACCTTCATGCAGGACTCAAGCGCACCATCATTCACCATGACATCAAACCTAGTAAAATTCTTTTGGACGACAACATGCACCCAAAACTCTCAGGTTTCAGCTTCAGCATATTGGGAGCACATTTCAAGGAAAAGCCAAAACCAATAAAAACGGATTTTGCAGGTACTTACGGCTACTTACCTATTGAGTCCTTTACGTCCGATACTATCACAGATAAATGGGATGTTTACGCATTTGGTATGACTCTACTGGAAGTTGTGGGGGTAAGAAGAATTTTTGAACGGGTTTATTTTGGAATAGAAAAAGAACTACTGGAGAAGTGTGTTGAGGAGAATATTGATCCGAAAATCAAAGGAGAGATAGCAGCAGAGTGTTGGCAAGTGTTTATAGATATAGCCTTAAGATGCATAAAAAATGAAGCTGATGAACGACCAGCAATGGGTGAAGTGGAGGTGGAACTTGAGCTTGCTCTATTGTTGCAGCAACAAGCAGATGCCACAAATATCGATAGTGATTATACCTTATTGTCCAAAACCGTGATTATACCAACATCAGGTGGGGGATTTGACTATGTCATTGGCCAATTTAAAGAACAGGAAACCGAATACAGTGACTCGGAAGACATGTTCAATAGGTAA 1089 0.4059 MFLKCFGESSSSGRQYPTVIEELCRHFSLADIQKSTNNFDDNRVIRDGACGKVFKGCLRHNDGSYYAVAVKRFHVQGSEGFKREVELLCQLHHPNCVSIVGFCKHKTESIVVYEYMSNGSLDQHLGSDVREALPWKKRLEICVGAARGLHHLHAGLKRTIIHHDIKPSKILLDDNMHPKLSGFSFSILGAHFKEKPKPIKTDFAGTYGYLPIESFTSDTITDKWDVYAFGMTLLEVVGVRRIFERVYFGIEKELLEKCVEENIDPKIKGEIAAECWQVFIDIALRCIKNEADERPAMGEVEVELELALLLQQQADATNIDSDYTLLSKTVIIPTSGGGFDYVIGQFKEQETEYSDSEDMFNR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00395 362 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
Viun5g00395 362 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Viun5g00395 362 Pfam Protein tyrosine and serine/threonine kinase 43 302 IPR001245 GO:0004672|GO:0006468
Viun5g00395 362 ProSiteProfiles Protein kinase domain profile. 39 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00395 362 PANTHER OS07G0166700 PROTEIN 23 311 IPR045272 GO:0004714|GO:0006468
Viun5g00395 362 Gene3D Phosphorylase Kinase; domain 1 7 115 - -
Viun5g00395 362 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Viun5g00395 362 FunFam Receptor-like protein kinase ANXUR2 116 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00395 Viun-Chr5 2292750 2294858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00395 7 315 Receptor kinase-like Gene Family AT3G51550 38.438 6.76e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun5g00395 PK_Tyr_Ser-Thr 2.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00395 - - var:108327132 468.388