Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00392 ATGTTTGTGAAATGTTTTGGTGAGTCAAGTTCATCTGGGAGACCATATCCAACAGTAATAGAAGAGTTGTGTCGTCATTTTTCTCTTGCTGATATTCGGAAATCAACCAACAATTTCGATGAAAACAGAGTGATTGTAGATGGAGCATGTGGTAAGCTATTCAAAGGTTGTCTCCGACATAATGATGGTTCTTATTACGAAGTCGCAGTGAAGCGATTTTACGGGCAAGGCAGCAAAATATTCAAAAGAGAAGTGGAGTTATTGTGTCAGCTTCACCACCCTAATTGTGAGTCTATTGTAGGATTTTGCAACCACAAAAAGGAGAAGATCATTGTGTATGAGTACATGTCCAATAGATCTCTATATACGCACCTCCAAGATGAGGGTAGGGAAGCACTGCCATGGAAAAAAAGGATAGAGATTTGCATAGGAGCAGCGCGTGGACTACACTACCTTCATGCAGGACTGAAGCGCACCATCATTCACCGCAACATCACACCTGGCCACATTCTTTTGGATGACAATATGCATCCAAAACTCTCAGGTTTCTGGCTTAGTATACTGGGAGCACATTTCAAGGAAAGGCCAAAACCAATACAAATGGATCTTGAAGGCACTTTGGGCCACTTATCTGTGGAGTACGTAAGGGACGGTACTGTCACCGATAAATGTGATGTTTACTCATTTGGTGTTGTTCTACTACAAGTTATGACCGGAAAAATAATTTATGGACAGGATAAAGATCATTGTTTAGCAAAAGAACTGCTGGAGAAGTGTGTTTTTGAGGAGCTTATTGATCCGAAAATCAAAGGAAAAATAGCAGCAGAGTGTTGGCAAGTGTTTATAGATATCACCTTGAGATGCATAAAGATCGAAGCCGATGAACGACCAGCAATGGGTGAAGTAGAGGTGGAACTTGAGCTTGCTCTGTTGTTGCAGGAACAAGCAGATCTCACAAACATCAACAATAGTGATTATACCTTATTGTCAGAAACCATTCTTAACCCAGAATCAGAGTGGGGGTGGGGATAA 1032 0.4128 MFVKCFGESSSSGRPYPTVIEELCRHFSLADIRKSTNNFDENRVIVDGACGKLFKGCLRHNDGSYYEVAVKRFYGQGSKIFKREVELLCQLHHPNCESIVGFCNHKKEKIIVYEYMSNRSLYTHLQDEGREALPWKKRIEICIGAARGLHYLHAGLKRTIIHRNITPGHILLDDNMHPKLSGFWLSILGAHFKERPKPIQMDLEGTLGHLSVEYVRDGTVTDKCDVYSFGVVLLQVMTGKIIYGQDKDHCLAKELLEKCVFEELIDPKIKGKIAAECWQVFIDITLRCIKIEADERPAMGEVEVELELALLLQEQADLTNINNSDYTLLSETILNPESEWGWG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00392 343 FunFam Receptor-like protein kinase ANXUR2 5 115 - -
Viun5g00392 343 ProSiteProfiles Protein kinase domain profile. 39 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g00392 343 PANTHER OS07G0166700 PROTEIN 23 313 IPR045272 GO:0004714|GO:0006468
Viun5g00392 343 Pfam Protein tyrosine and serine/threonine kinase 43 304 IPR001245 GO:0004672|GO:0006468
Viun5g00392 343 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Viun5g00392 343 SUPERFAMILY Protein kinase-like (PK-like) 14 311 IPR011009 -
Viun5g00392 343 Gene3D Phosphorylase Kinase; domain 1 8 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00392 Viun-Chr5 2274658 2276017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00392 7 317 Receptor kinase-like Gene Family AT3G51550 39.198 2.59e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun5g00392 PK_Tyr_Ser-Thr 3.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00392 - - var:108327132 457.603