Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g00349 ATGACGATTGATAGTTTAGCACCCAAGACAGAGAAGAAGAGATCAAGAAAGAACAAGGCAGTGGTTAATGAAAATGCACCCTTGTTACCTAAAAGTCAGGGTCAGGGGAGTGATGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCTACCACAATTATTGGTGCTGGAATCATGGCGTTGCCTGCAACCTTGAAACAGTTGGGAATGGTGCCTGGCCTTATTGCCATCATCATCATGGCCTTCTTGACAGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGAGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAATTATGGAAAAGCTCTGGCGCAGATATGTGTCATAATCAATAACATCGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTGTCTGGAACATCTTCAGGTGGAGATCATCATTACGGTATCCTTGAAGGATGGTTTGGTCTGCACTGGTGGACAGGACGGACATTTGTTGTTCTTATTACAACACTCGCCATATTTGCACCCCTTGCGAGCTTTAAACGAATTGATTCATTGAGATTCACATCTGCCCTTTCAGTTGCACTAGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTCAAGATAATAAGTGGAGGCATTGCGATGCCCAGACTCTTCCCAGTCACTACAGATGCGGCATCATTCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCTTATATCTGCCACTACAATGTTCACAGCATAGACAACGAGCTTGAGGACTCATCACAGATGCGAGGGGTTGTGCAAACTGCCCTTATTCTATGCTCTTCTGTGTATGTTATGATAAGTTTCTTTGGTTTCCTCCTATTTGGAGAAGGAACTCTTGATGATGTGTTGGCCAATTTCGATACCGATCTTGGAATCCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCAGCACACCTGATGCTTGTATTCCCAGTTGTCTTCTATCCATTGCGGCTCAATATAGATGGTCTCCTCTTCTCTTCATCAAGGCCTCTGGTTCTTGATAATTTCAGATTTGCATCTCTGACTATTTCCCTTATTGGTGTTATCTTTCTCGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAATTTACCGGAGCAACTGCTGCTGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTCAAGGACCGCTACAACATTGCAACTAGATCAGACAAGATTTTATCTATTGTTATGATAGTCTTGGCTGTGTTCTCTAACGTGGTGGCTATATATAGTGATGCATATGCCTTGCTCAAGCAGAACCAAACTTCACGTGAATGA 1398 0.427 MTIDSLAPKTEKKRSRKNKAVVNENAPLLPKSQGQGSDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMVPGLIAIIIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGNYGKALAQICVIINNIGVLIVYMIIIGDVLSGTSSGGDHHYGILEGWFGLHWWTGRTFVVLITTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIISGGIAMPRLFPVTTDAASFFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALILCSSVYVMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASLTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATRSDKILSIVMIVLAVFSNVVAIYSDAYALLKQNQTSRE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g00349 465 PANTHER AMINO ACID TRANSPORTER 45 444 - -
Viun5g00349 465 Pfam Transmembrane amino acid transporter protein 47 451 IPR013057 -
Viun5g00349 465 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g00349 Viun-Chr5 2097865 2101983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g00349 16 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 70.354 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g00349 K14207 - gmx:100796345 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g00349 5 2097865 2101983 Viun5g00349 5 2097865 2101983 ECH
Viun4g00877 4 7454489 7458069 Viun5g00349 5 2097865 2101983 PCT